Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phyllosticta_20citricarpa_20[genbank_20GCA_5F001604955.1_202016-03- 31] 5,748 sequences; 31,127,197 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq1366 340 3e-91 seq1360 131 3e-28 >seq1366 Length=1815 Score = 340 bits (376), Expect = 3e-91 Identities = 240/268 (90%), Gaps = 5/268 (2%) Strand=Plus/Plus Query 11 AACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGTGCCGCGAAGC 70 ||||||||| |||||| ||||||||||||||||||||| |||| |||||||||||||||| Sbjct 1 AACCGCGGA-TTCAGA-TAATTGGTTTTTGCGGCTGTCCGACCGGGCAGTGCCGCGAAGC 58 Query 71 TACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCAGAACGGGGTG 130 |||||||||| ||||||| ||||||||||||||||||||||||| |||| |||||||||| Sbjct 59 TACCATCTGCCGGATTAT-GCTGAACGCCTCTAAGTCAGAATCCGTGCCGGAACGGGGTG 117 Query 131 ATTCTCTCCTGCACATCGTAGTCGGATACGAATAGGCTTCGGCCCCGAACCTTAGCAGGC 190 |||||| |||||||||||||||||||||||||||||| | ||||| ||| | |||||||| Sbjct 118 ATTCTC-CCTGCACATCGTAGTCGGATACGAATAGGCCTTGGCCCAGAATCCTAGCAGGC 176 Query 191 CGGCAACGGGCGTCCCGCGGAAGCGCGGGGCGCTCAGCTGGCGGATTGCAATTTCACCAT 250 |||| ||||| | ||| |||| ||||| ||||||||| ||||||||||||| || Sbjct 177 CGGCGACGGGGGCTCCGTTGAAG-TCGGGGTCTCCAGCTGGCGAATTGCAATTTCACAAT 235 Query 251 GCGCAGGGATAAATCCTTTGCAGACGAC 278 |||||||||||||||||||||||||||| Sbjct 236 GCGCAGGGATAAATCCTTTGCAGACGAC 263 >seq1360 Length=573 Score = 131 bits (144), Expect = 3e-28 Identities = 84/89 (94%), Gaps = 2/89 (2%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||||||| |||||| ||||||||||||||||||||| |||| |||||| Sbjct 87 GTACGAGAGGAACCGCGGA-TTCAGA-TAATTGGTTTTTGCGGCTGTCCGACCGGGCAGT 30 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATG 89 |||||||||||||||||||| |||||||| Sbjct 29 GCCGCGAAGCTACCATCTGCCGGATTATG 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 819154383872