Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phyllosticta_20citricarpa_20[genbank_20GCA_5F001604955.1_202016-03-
31] 5,748 sequences; 31,127,197 total letters
Query= AAMG01002244.1
Length=504
Score E
Sequences producing significant alignments: (Bits) Value
seq5094 444 2e-122
seq5737 302 1e-79
>seq5094
Length=2650
Score = 444 bits (492), Expect = 2e-122
Identities = 254/259 (98%), Gaps = 0/259 (0%)
Strand=Plus/Plus
Query 246 CCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGGTTTTTT 305
||||||||||||||||||||| |||| |||||||||||||||||||||| ||||||||||
Sbjct 1 CCATGCGATTCGTTAAGTTATCATGATTCACCAAGGAGCCCCGAAGGGCATTGGTTTTTT 60
Query 306 ATCTAATAAATACACCCCTTCCGAAGTCGGGGTTTTTAGCATGTATTAGCTCTAGAATTA 365
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 61 ATCTAATAAATACACCCCTTCCGAAGTCGGGGTTTTTAGCATGTATTAGCTCTAGAATTA 120
Query 366 CCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATGAGCCAT 425
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 121 CCACGGTTATCCAAGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATGAGCCAT 180
Query 426 TCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTTTGAGACA 485
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 181 TCGCAGTTTCACAGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTTTGAGACA 240
Query 486 AGCATATGACTACTGGCAG 504
|||||||||||||||||||
Sbjct 241 AGCATATGACTACTGGCAG 259
>seq5737
Length=362
Score = 302 bits (334), Expect = 1e-79
Identities = 173/177 (98%), Gaps = 0/177 (0%)
Strand=Plus/Minus
Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60
|||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||
Sbjct 177 GTACTCATTCCAATTACAAGACTCGAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 118
Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 117 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 58
Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATG 177
|||||||||||||||||||||| |||||||||||||||||||||||||| |||||||
Sbjct 57 TCTCAGGCTCCCTCTCCGGAATAGAACCCTAATTCCCCGTTACCCGTTGCTACCATG 1
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1510313182208
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |