Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phyllosticta_20citricarpa_20[genbank_20GCA_5F001604955.1_202016-03- 31] 5,748 sequences; 31,127,197 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq5094 444 2e-122 seq5737 302 1e-79 >seq5094 Length=2650 Score = 444 bits (492), Expect = 2e-122 Identities = 254/259 (98%), Gaps = 0/259 (0%) Strand=Plus/Plus Query 246 CCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGGTTTTTT 305 ||||||||||||||||||||| |||| |||||||||||||||||||||| |||||||||| Sbjct 1 CCATGCGATTCGTTAAGTTATCATGATTCACCAAGGAGCCCCGAAGGGCATTGGTTTTTT 60 Query 306 ATCTAATAAATACACCCCTTCCGAAGTCGGGGTTTTTAGCATGTATTAGCTCTAGAATTA 365 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 61 ATCTAATAAATACACCCCTTCCGAAGTCGGGGTTTTTAGCATGTATTAGCTCTAGAATTA 120 Query 366 CCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATGAGCCAT 425 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 121 CCACGGTTATCCAAGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATGAGCCAT 180 Query 426 TCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTTTGAGACA 485 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 181 TCGCAGTTTCACAGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTTTGAGACA 240 Query 486 AGCATATGACTACTGGCAG 504 ||||||||||||||||||| Sbjct 241 AGCATATGACTACTGGCAG 259 >seq5737 Length=362 Score = 302 bits (334), Expect = 1e-79 Identities = 173/177 (98%), Gaps = 0/177 (0%) Strand=Plus/Minus Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60 |||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||| Sbjct 177 GTACTCATTCCAATTACAAGACTCGAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 118 Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 117 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 58 Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATG 177 |||||||||||||||||||||| |||||||||||||||||||||||||| ||||||| Sbjct 57 TCTCAGGCTCCCTCTCCGGAATAGAACCCTAATTCCCCGTTACCCGTTGCTACCATG 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510313182208