Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phyllosticta_20citricarpa_20[genbank_20GCA_5F001604955.1_202016-03-
31] 5,748 sequences; 31,127,197 total letters
Query= NC_010671.1
Length=124279
Score E
Sequences producing significant alignments: (Bits) Value
seq5249 351 8e-92
seq1666 187 2e-42
>seq5249
Length=10599
Score = 351 bits (388), Expect = 8e-92
Identities = 665/970 (69%), Gaps = 8/970 (1%)
Strand=Plus/Minus
Query 65993 ACAAACTTGGGAAGGGCAAGAGATGCGAGGTTGCAGACAGCTATCTCGTCAGGAGCGGTA 66052
||||| |||||||||| || || || | |||||||||||| | |||||| || || ||
Sbjct 8102 ACAAAGGTGGGAAGGGCCAGGGAGGCCAAGTTGCAGACAGCAACCTCGTCGGGGGCAGTG 8043
Query 66053 TACTCGACAATTTCGGTGCACAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTGATTA 66112
||||||||||| || |||||| || || ||| ||||| |||| |||| ||| ||
Sbjct 8042 TACTCGACAATCTCACAGCACAGGTTGGAGCTGCGAATGGTACCCAGGTTCTTTTGGTTG 7983
Query 66113 CTCTTGCGATTGCATGCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTGGGAC 66172
|||||||| ||||| || |||||||| | |||| | || |||||||||| || | |
Sbjct 7982 CTCTTGCGGTTGCAAGCGTCCTTGTAGAGCATGAAGGGGTTGCCGGTCTCGGTCTGAGCC 7923
Query 66173 TCAATGATGGCGTGCCAAAGAGCGCGTGCCTTCACCGTACGTACCGCC-CTACCTTTGCG 66231
|| | ||||||| ||| || | || | || | || || | |||| |
Sbjct 7922 TCCAAAATGGCGTACCACAGCTTCTGGGCGCGGATAGT-CTCACGACCACGGCCTTCCCT 7864
Query 66232 TTCGTAATGTTCGTAGAGGTGTTCGAAGGATTCACCCCATACTTCGGACAGACATGGACA 66291
||||| || || || | || || || || | || |||| |||| ||
Sbjct 7863 CTCGTACCTCTCATACAGCTCCTCAAACTCGTCGCCGTAGACATCGGCGAGACCCGGGGC 7804
Query 66292 CTTGTGTGGACACATCAGCGACCAATCACCATCCTGTTCTACACGACGCATAAATAGATC 66351
|| ||| || ||||| || | |||||| || | || || ||||| ||| || |||||
Sbjct 7803 CTCGTGAGGGCACATGAGAGTCCAATCGCCGTTTTGCTCGACACGCTTCATGAACAGATC 7744
Query 66352 AGGTATCCAGAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAATGCCGTGATTTTT 66411
||| | ||| ||||||||||| | |||||||| || ||| || | ||||| || ||
Sbjct 7743 AGGAACCCACAGGGCGTAGAACAAGTCGCGTGCGCGGACCTCTTCCTTTCCGTGGTTCTT 7684
Query 66412 GCGCAAGTCGAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAACGA 66471
||| | ||||||||| |||| |||||| ||||| || |||||||||||||| || |
Sbjct 7683 GCGGAGGTCGAGGAAGGGGAAGACGTCGGCGTGCCAAGGCTCCAGGTAGATGGCAAAAGC 7624
Query 66472 GCCCATACGTTTGCCGCCACCTTGGTCGACGTAGCGAGCGACATTGTTGAAGACACGCAA 66531
|| || ||| |||||| ||||| |||||||||||| |||||| ||||||| |
Sbjct 7623 ACCAGGGCGCTTGTTGCCACCCTGGTCAACGTAGCGAGCGGTGTTGTTGTAGACACGGAG 7564
Query 66532 CATCGGTACGAGCCCGTTAGATTTGCCATTGGTGCCGTCGATGGGGGATCCTCGTGCCCG 66591
||| || | || ||||| || |||| ||||| || | ||| ||| || || ||
Sbjct 7563 CATGGGAATCAGGCCGTTGGAGGTGCCGTTGGTACCAGCAATGTAGGAGCCAGTTGAACG 7504
Query 66592 TATATCGTGAACATTCAGACCAATACCACCGGCCGTCTTCGAGATGGCAGCACAA-TC-G 66649
|| ||| || || ||||| || |||||||||||||| || || |||||| ||
Sbjct 7503 GATGCGGTGGACGTTGAGACCGATTCCACCGGCCGTCTTGGAAATCATGGCACAAGTCTT 7444
Query 66650 GCCACTGTCCGGAATATGCCGTCAATGGAGTCACCCTTGATGGTCAGGAGGTAGCATGAA 66709
| |||| | | ||||| || ||| ||| |||| ||| | | | |||||||
Sbjct 7443 GAGGGTGTC--GTAGATGCCCTCGATGCTGTCCTCCTTCATGTCGATCAAGAAGCATGAT 7386
Query 66710 CTAAGTTGGGGTTTGGGTGTGGCGGCCGAGAAGAGGGTGGGTGTAGCGTGCGTAAAGTAA 66769
||| ||||| ||||| || | || ||| | |||||| | |||||| ||||||||
Sbjct 7385 GCAAGCTGGGGCTTGGGGGTACCAGCGTTGAACAAGGTGGGAGAAGCGTGGGTAAAGTAC 7326
Query 66770 TGGCGAGACATGTAATTGTACGTCTCGATGACAGCATCAATGTTTTCGCCATGAATCCCG 66829
| ||||||| | |||||||| || ||| | |||||||| ||||| || || ||
Sbjct 7325 TTTTGAGACATCAAGTTGTACGTTTCAATGGCCTTTTCAATGTTCTCGCCGTGGATTCCA 7266
Query 66830 AGTGC-ACATCGCATCAGGAGGTATTGAGGCCGTTCGACCAGCCGATCCTTGATATGCAT 66888
| || ||| ||||| | | || || || | |||| | | | | | ||| | |
Sbjct 7265 ACAGCGACA-CGCATAATCATGTGCTGTGGTCTTTCGGCAACCTTGCCATCGATGCGGAG 7207
Query 66889 TAAGTAGGAGCGTTCCAGGGTCTTGATACCAAAGTACGAGTAATTGAAATCGTTAGCATG 66948
||||| || | || || ||||||| |||||||| ||| ||||| ||| | |
Sbjct 7206 CAAGTATGACCTCTCGAGCGTCTTGAAGCCAAAGTATTGGTAGTTGAAGTCGCGGTCGTA 7147
Query 66949 CACGATGGCC 66958
|||||||||
Sbjct 7146 GACGATGGCC 7137
Score = 100 bits (110), Expect = 2e-16
Identities = 321/491 (65%), Gaps = 8/491 (2%)
Strand=Plus/Minus
Query 65078 TCGACCGTGAACTGGATCGCATTAGCAGCCGCCTTGGTCCTAAGATAGTACATGCCGGTC 65137
||||| |||||||| || | || || |||| || | || ||||||||||| |||
Sbjct 8998 TCGACGGTGAACTGAATGGGGGCAGATGCAGCCTGAGTGCGCAGGTAGTACATGCCCGTC 8939
Query 65138 TTGAGGCCAGCACGCCAAGCATAGAAATGCATCGATGATAATTTTGCATAAT-TCGGCTC 65196
|| || ||| ||| || || ||||| || | | || |||| | | |||||
Sbjct 8938 TTCAGACCAAGCTTCCAGCCAGCAAAGTGCATGGAAG-TGATCTTGCCCATCGTAGGCTC 8880
Query 65197 GGCCACATGCATATTCAACGACTGACTCTGATCGATGTAACGACCACGATCTGCAGCCAT 65256
|| || || || | ||| ||| ||| ||||| | |||||| || ||||||||
Sbjct 8879 CTTCATGTGGATGTTGAGCGATTGAGACTGGTCGATAAAGGCACCACGGTCGGCAGCCAT 8820
Query 65257 GTCAATGATACGACGTCCCGATATCTCCCAGACGGTCTTGTACAGGCGACGT-ACCTCAA 65315
| | ||| || || |||||||| || |||||||| ||| | | | | ||
Sbjct 8819 CTGGACGATGTTGCGCTGAGAAATCTCCCACACAGTCTTGTAGAGG-GCCTTGATGTCGT 8761
Query 65316 TTGGAATCTCCTCAATGTCCTGGACTGAACCAC--GACGTGCAATAATGCGATTACGCAT 65373
|| || | ||| | || | || ||| |||| | || ||||| || |||
Sbjct 8760 CGGGGATGTTGGGAATTTGTTGAATAGAGCCATTGGACGCG--ATGATGCGGTTCTTCAT 8703
Query 65374 CGACTCTGACCACAAACCCAAATCGATAAGATGTTGAACCAAGTGACGATTGATGACTTG 65433
|| ||||||| ||||| |||| ||| | | || ||| | |||| |||||
Sbjct 8702 GTTGTCCGACCACAGACCCATGTCGACAAGGTCCTTAAGCAACCATGGGTTGACAACTTG 8643
Query 65434 GAACTCGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGGGTTCAAAGGATTC 65493
|||||| || | || |||||||| || |||||||| ||| ||| ||||| | ||
Sbjct 8642 GAACTCACCAGCGAGCACACGACGCGAGTAAATGTTGGAGGTGTAGGGCTCAAAACACTC 8583
Query 65494 AGTGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGACCAACAATGAGTT 65553
|| ||| || |||||| ||| || ||||| ||||||||||| || | ||| |||
Sbjct 8582 GTTGAAGCCAAGGATTTGGCTAGTCGAGGCAGTAGGCATGGGAGCAACAAGCAAGCTGTT 8523
Query 65554 TCGCAATCCGT 65564
|||| ||||
Sbjct 8522 GCGCACGCCGT 8512
>seq1666
Length=59928
Score = 187 bits (206), Expect = 2e-42
Identities = 305/436 (70%), Gaps = 5/436 (1%)
Strand=Plus/Minus
Query 61498 GCATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTG 61557
|| ||||| | ||||||||| | || ||||| || || || || | ||||| ||| |
Sbjct 55633 GCCTTTGCTGCCGTCGAGGGTATCTTCTTCAGCGGCTCCTTCGCGTCCATCTTCTGGCTC 55574
Query 61558 AAGAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAG 61617
||||| ||||| || ||||| |||||||| ||| ||| ||| | || || |||||||||
Sbjct 55573 AAGAAGCGTGGTCTGATGCCTGGTCTGACATTCTCCAACGAGCTCATCTCTCGCGACGAG 55514
Query 61618 GGCATGCATTGTGATTTTGCTGTTTTGCTATTCAAACGCTATCTGGT-GAATCGTCCGTC 61676
|||||||| || ||||| |||| ||| | | ||| || ||| | | |
Sbjct 55513 GGCATGCACACCGACTTTGCCTGCCTGCTCTTCTCTCAC-ATCAAGTCGAAGCCGACCCC 55455
Query 61677 GGAGGAGCGTGTGGGTGAGATTGTTCGTGAGGCGGTAACTATCGAACAGGAATTTCTGAC 61736
|||| ||| | |||| || ||||| || || || || || || |||||
Sbjct 55454 CGAGGC---TGTTGAGAAGATCATTGTCGAGGCCGTCGAGATTGAGCAAGAGTTCCTGAC 55398
Query 61737 TGACGCTTTGCCCGTCTCACTCATCGGCATGAATTGTGGACTAATGTCGCAGTATATTGA 61796
||||||| | ||||| | || |||||||||| ||| || |||| ||||| |||||
Sbjct 55397 TGACGCTCTCCCCGTTGCTCTGCTCGGCATGAACGCTGGCCTCATGTGCCAGTACATTGA 55338
Query 61797 ATTTGTTGCCGACCGTCTGTTGGTCGATTTGGGTATGAAGCGGATCTATAATACGAAAAA 61856
|||||||| ||||| ||| |||| | | || | ||| | ||| || | | ||
Sbjct 55337 GTTTGTTGCTGACCGCCTGCTGGTGGCGCTTGGCAACAAGAAGCACTACAACTCTACCAA 55278
Query 61857 CCCATTTGATTTCATGGACATGATTTCGCTGGATGGCAAGACGAATTTTTTCGAGAAACG 61916
||| || || |||||||| | |||||||| | |||||||| || || |||||||| ||
Sbjct 55277 CCCCTTCGACTTCATGGAGAACATTTCGCTCAACGGCAAGACCAACTTCTTCGAGAAGCG 55218
Query 61917 TGTAGGCGACTATCAA 61932
|| || |||||||||
Sbjct 55217 CGTTGGTGACTATCAA 55202
Score = 127 bits (140), Expect = 2e-24
Identities = 210/297 (71%), Gaps = 7/297 (2%)
Strand=Plus/Minus
Query 61087 ATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTG 61146
|| |||| |||||||| ||||| || || || |||||||| | |||||| | ||| ||
Sbjct 56096 ATCTGGCAAATGTACAAGAAGGCCGAGGCCTCGTTCTGGACCGCCGAGGAGATTGATCTG 56037
Query 61147 TCCAAAGACATGAATGACTGGGA---GCGTTT-ATCGAGCGGTGAACAACATTTCATTAA 61202
||||| || | | |||||| | |||| | | ||| || || | |||||
Sbjct 56036 TCCAAGGATCTCCACGACTGGAACAAGCGTCTGAACGA-CGACGAGCGCTTCTTCATCTC 55978
Query 61203 ACATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACG 61262
|| || | || ||||||||||| || || || || ||||| ||||| || | || ||
Sbjct 55977 CCACGTTCTCGCCTTCTTTGCCGCGTCTGATGGCATTGTCAACGAGAACTTGGTCGAGCG 55918
Query 61263 TTTC-GCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCA 61321
||| || | | || |||| | | ||||| || || |||||||| ||||||||| |
Sbjct 55917 CTTCAGCTCCGAAG-TGCAGATTCCCGAGGCTCGCTGCTTCTACGGTTTCCAGATTATGA 55859
Query 61322 TGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGC 61378
||||||| |||||||||||| ||| | | ||||| ||||||||||| ||||
Sbjct 55858 TGGAGAACATCCACTCGGAGACATACTCGCTCTTGATCGACACGTACATCAGCGAGC 55802
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397540148870720
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