Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phyllosticta_20citricarpa_20[genbank_20GCA_5F001604955.1_202016-03- 31] 5,748 sequences; 31,127,197 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq5249 351 8e-92 seq1666 187 2e-42 >seq5249 Length=10599 Score = 351 bits (388), Expect = 8e-92 Identities = 665/970 (69%), Gaps = 8/970 (1%) Strand=Plus/Minus Query 65993 ACAAACTTGGGAAGGGCAAGAGATGCGAGGTTGCAGACAGCTATCTCGTCAGGAGCGGTA 66052 ||||| |||||||||| || || || | |||||||||||| | |||||| || || || Sbjct 8102 ACAAAGGTGGGAAGGGCCAGGGAGGCCAAGTTGCAGACAGCAACCTCGTCGGGGGCAGTG 8043 Query 66053 TACTCGACAATTTCGGTGCACAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTGATTA 66112 ||||||||||| || |||||| || || ||| ||||| |||| |||| ||| || Sbjct 8042 TACTCGACAATCTCACAGCACAGGTTGGAGCTGCGAATGGTACCCAGGTTCTTTTGGTTG 7983 Query 66113 CTCTTGCGATTGCATGCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTGGGAC 66172 |||||||| ||||| || |||||||| | |||| | || |||||||||| || | | Sbjct 7982 CTCTTGCGGTTGCAAGCGTCCTTGTAGAGCATGAAGGGGTTGCCGGTCTCGGTCTGAGCC 7923 Query 66173 TCAATGATGGCGTGCCAAAGAGCGCGTGCCTTCACCGTACGTACCGCC-CTACCTTTGCG 66231 || | ||||||| ||| || | || | || | || || | |||| | Sbjct 7922 TCCAAAATGGCGTACCACAGCTTCTGGGCGCGGATAGT-CTCACGACCACGGCCTTCCCT 7864 Query 66232 TTCGTAATGTTCGTAGAGGTGTTCGAAGGATTCACCCCATACTTCGGACAGACATGGACA 66291 ||||| || || || | || || || || | || |||| |||| || Sbjct 7863 CTCGTACCTCTCATACAGCTCCTCAAACTCGTCGCCGTAGACATCGGCGAGACCCGGGGC 7804 Query 66292 CTTGTGTGGACACATCAGCGACCAATCACCATCCTGTTCTACACGACGCATAAATAGATC 66351 || ||| || ||||| || | |||||| || | || || ||||| ||| || ||||| Sbjct 7803 CTCGTGAGGGCACATGAGAGTCCAATCGCCGTTTTGCTCGACACGCTTCATGAACAGATC 7744 Query 66352 AGGTATCCAGAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAATGCCGTGATTTTT 66411 ||| | ||| ||||||||||| | |||||||| || ||| || | ||||| || || Sbjct 7743 AGGAACCCACAGGGCGTAGAACAAGTCGCGTGCGCGGACCTCTTCCTTTCCGTGGTTCTT 7684 Query 66412 GCGCAAGTCGAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAACGA 66471 ||| | ||||||||| |||| |||||| ||||| || |||||||||||||| || | Sbjct 7683 GCGGAGGTCGAGGAAGGGGAAGACGTCGGCGTGCCAAGGCTCCAGGTAGATGGCAAAAGC 7624 Query 66472 GCCCATACGTTTGCCGCCACCTTGGTCGACGTAGCGAGCGACATTGTTGAAGACACGCAA 66531 || || ||| |||||| ||||| |||||||||||| |||||| ||||||| | Sbjct 7623 ACCAGGGCGCTTGTTGCCACCCTGGTCAACGTAGCGAGCGGTGTTGTTGTAGACACGGAG 7564 Query 66532 CATCGGTACGAGCCCGTTAGATTTGCCATTGGTGCCGTCGATGGGGGATCCTCGTGCCCG 66591 ||| || | || ||||| || |||| ||||| || | ||| ||| || || || Sbjct 7563 CATGGGAATCAGGCCGTTGGAGGTGCCGTTGGTACCAGCAATGTAGGAGCCAGTTGAACG 7504 Query 66592 TATATCGTGAACATTCAGACCAATACCACCGGCCGTCTTCGAGATGGCAGCACAA-TC-G 66649 || ||| || || ||||| || |||||||||||||| || || |||||| || Sbjct 7503 GATGCGGTGGACGTTGAGACCGATTCCACCGGCCGTCTTGGAAATCATGGCACAAGTCTT 7444 Query 66650 GCCACTGTCCGGAATATGCCGTCAATGGAGTCACCCTTGATGGTCAGGAGGTAGCATGAA 66709 | |||| | | ||||| || ||| ||| |||| ||| | | | ||||||| Sbjct 7443 GAGGGTGTC--GTAGATGCCCTCGATGCTGTCCTCCTTCATGTCGATCAAGAAGCATGAT 7386 Query 66710 CTAAGTTGGGGTTTGGGTGTGGCGGCCGAGAAGAGGGTGGGTGTAGCGTGCGTAAAGTAA 66769 ||| ||||| ||||| || | || ||| | |||||| | |||||| |||||||| Sbjct 7385 GCAAGCTGGGGCTTGGGGGTACCAGCGTTGAACAAGGTGGGAGAAGCGTGGGTAAAGTAC 7326 Query 66770 TGGCGAGACATGTAATTGTACGTCTCGATGACAGCATCAATGTTTTCGCCATGAATCCCG 66829 | ||||||| | |||||||| || ||| | |||||||| ||||| || || || Sbjct 7325 TTTTGAGACATCAAGTTGTACGTTTCAATGGCCTTTTCAATGTTCTCGCCGTGGATTCCA 7266 Query 66830 AGTGC-ACATCGCATCAGGAGGTATTGAGGCCGTTCGACCAGCCGATCCTTGATATGCAT 66888 | || ||| ||||| | | || || || | |||| | | | | | ||| | | Sbjct 7265 ACAGCGACA-CGCATAATCATGTGCTGTGGTCTTTCGGCAACCTTGCCATCGATGCGGAG 7207 Query 66889 TAAGTAGGAGCGTTCCAGGGTCTTGATACCAAAGTACGAGTAATTGAAATCGTTAGCATG 66948 ||||| || | || || ||||||| |||||||| ||| ||||| ||| | | Sbjct 7206 CAAGTATGACCTCTCGAGCGTCTTGAAGCCAAAGTATTGGTAGTTGAAGTCGCGGTCGTA 7147 Query 66949 CACGATGGCC 66958 ||||||||| Sbjct 7146 GACGATGGCC 7137 Score = 100 bits (110), Expect = 2e-16 Identities = 321/491 (65%), Gaps = 8/491 (2%) Strand=Plus/Minus Query 65078 TCGACCGTGAACTGGATCGCATTAGCAGCCGCCTTGGTCCTAAGATAGTACATGCCGGTC 65137 ||||| |||||||| || | || || |||| || | || ||||||||||| ||| Sbjct 8998 TCGACGGTGAACTGAATGGGGGCAGATGCAGCCTGAGTGCGCAGGTAGTACATGCCCGTC 8939 Query 65138 TTGAGGCCAGCACGCCAAGCATAGAAATGCATCGATGATAATTTTGCATAAT-TCGGCTC 65196 || || ||| ||| || || ||||| || | | || |||| | | ||||| Sbjct 8938 TTCAGACCAAGCTTCCAGCCAGCAAAGTGCATGGAAG-TGATCTTGCCCATCGTAGGCTC 8880 Query 65197 GGCCACATGCATATTCAACGACTGACTCTGATCGATGTAACGACCACGATCTGCAGCCAT 65256 || || || || | ||| ||| ||| ||||| | |||||| || |||||||| Sbjct 8879 CTTCATGTGGATGTTGAGCGATTGAGACTGGTCGATAAAGGCACCACGGTCGGCAGCCAT 8820 Query 65257 GTCAATGATACGACGTCCCGATATCTCCCAGACGGTCTTGTACAGGCGACGT-ACCTCAA 65315 | | ||| || || |||||||| || |||||||| ||| | | | | || Sbjct 8819 CTGGACGATGTTGCGCTGAGAAATCTCCCACACAGTCTTGTAGAGG-GCCTTGATGTCGT 8761 Query 65316 TTGGAATCTCCTCAATGTCCTGGACTGAACCAC--GACGTGCAATAATGCGATTACGCAT 65373 || || | ||| | || | || ||| |||| | || ||||| || ||| Sbjct 8760 CGGGGATGTTGGGAATTTGTTGAATAGAGCCATTGGACGCG--ATGATGCGGTTCTTCAT 8703 Query 65374 CGACTCTGACCACAAACCCAAATCGATAAGATGTTGAACCAAGTGACGATTGATGACTTG 65433 || ||||||| ||||| |||| ||| | | || ||| | |||| ||||| Sbjct 8702 GTTGTCCGACCACAGACCCATGTCGACAAGGTCCTTAAGCAACCATGGGTTGACAACTTG 8643 Query 65434 GAACTCGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGGGTTCAAAGGATTC 65493 |||||| || | || |||||||| || |||||||| ||| ||| ||||| | || Sbjct 8642 GAACTCACCAGCGAGCACACGACGCGAGTAAATGTTGGAGGTGTAGGGCTCAAAACACTC 8583 Query 65494 AGTGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGACCAACAATGAGTT 65553 || ||| || |||||| ||| || ||||| ||||||||||| || | ||| ||| Sbjct 8582 GTTGAAGCCAAGGATTTGGCTAGTCGAGGCAGTAGGCATGGGAGCAACAAGCAAGCTGTT 8523 Query 65554 TCGCAATCCGT 65564 |||| |||| Sbjct 8522 GCGCACGCCGT 8512 >seq1666 Length=59928 Score = 187 bits (206), Expect = 2e-42 Identities = 305/436 (70%), Gaps = 5/436 (1%) Strand=Plus/Minus Query 61498 GCATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTG 61557 || ||||| | ||||||||| | || ||||| || || || || | ||||| ||| | Sbjct 55633 GCCTTTGCTGCCGTCGAGGGTATCTTCTTCAGCGGCTCCTTCGCGTCCATCTTCTGGCTC 55574 Query 61558 AAGAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAG 61617 ||||| ||||| || ||||| |||||||| ||| ||| ||| | || || ||||||||| Sbjct 55573 AAGAAGCGTGGTCTGATGCCTGGTCTGACATTCTCCAACGAGCTCATCTCTCGCGACGAG 55514 Query 61618 GGCATGCATTGTGATTTTGCTGTTTTGCTATTCAAACGCTATCTGGT-GAATCGTCCGTC 61676 |||||||| || ||||| |||| ||| | | ||| || ||| | | | Sbjct 55513 GGCATGCACACCGACTTTGCCTGCCTGCTCTTCTCTCAC-ATCAAGTCGAAGCCGACCCC 55455 Query 61677 GGAGGAGCGTGTGGGTGAGATTGTTCGTGAGGCGGTAACTATCGAACAGGAATTTCTGAC 61736 |||| ||| | |||| || ||||| || || || || || || ||||| Sbjct 55454 CGAGGC---TGTTGAGAAGATCATTGTCGAGGCCGTCGAGATTGAGCAAGAGTTCCTGAC 55398 Query 61737 TGACGCTTTGCCCGTCTCACTCATCGGCATGAATTGTGGACTAATGTCGCAGTATATTGA 61796 ||||||| | ||||| | || |||||||||| ||| || |||| ||||| ||||| Sbjct 55397 TGACGCTCTCCCCGTTGCTCTGCTCGGCATGAACGCTGGCCTCATGTGCCAGTACATTGA 55338 Query 61797 ATTTGTTGCCGACCGTCTGTTGGTCGATTTGGGTATGAAGCGGATCTATAATACGAAAAA 61856 |||||||| ||||| ||| |||| | | || | ||| | ||| || | | || Sbjct 55337 GTTTGTTGCTGACCGCCTGCTGGTGGCGCTTGGCAACAAGAAGCACTACAACTCTACCAA 55278 Query 61857 CCCATTTGATTTCATGGACATGATTTCGCTGGATGGCAAGACGAATTTTTTCGAGAAACG 61916 ||| || || |||||||| | |||||||| | |||||||| || || |||||||| || Sbjct 55277 CCCCTTCGACTTCATGGAGAACATTTCGCTCAACGGCAAGACCAACTTCTTCGAGAAGCG 55218 Query 61917 TGTAGGCGACTATCAA 61932 || || ||||||||| Sbjct 55217 CGTTGGTGACTATCAA 55202 Score = 127 bits (140), Expect = 2e-24 Identities = 210/297 (71%), Gaps = 7/297 (2%) Strand=Plus/Minus Query 61087 ATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTG 61146 || |||| |||||||| ||||| || || || |||||||| | |||||| | ||| || Sbjct 56096 ATCTGGCAAATGTACAAGAAGGCCGAGGCCTCGTTCTGGACCGCCGAGGAGATTGATCTG 56037 Query 61147 TCCAAAGACATGAATGACTGGGA---GCGTTT-ATCGAGCGGTGAACAACATTTCATTAA 61202 ||||| || | | |||||| | |||| | | ||| || || | ||||| Sbjct 56036 TCCAAGGATCTCCACGACTGGAACAAGCGTCTGAACGA-CGACGAGCGCTTCTTCATCTC 55978 Query 61203 ACATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACG 61262 || || | || ||||||||||| || || || || ||||| ||||| || | || || Sbjct 55977 CCACGTTCTCGCCTTCTTTGCCGCGTCTGATGGCATTGTCAACGAGAACTTGGTCGAGCG 55918 Query 61263 TTTC-GCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCA 61321 ||| || | | || |||| | | ||||| || || |||||||| ||||||||| | Sbjct 55917 CTTCAGCTCCGAAG-TGCAGATTCCCGAGGCTCGCTGCTTCTACGGTTTCCAGATTATGA 55859 Query 61322 TGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGC 61378 ||||||| |||||||||||| ||| | | ||||| ||||||||||| |||| Sbjct 55858 TGGAGAACATCCACTCGGAGACATACTCGCTCTTGATCGACACGTACATCAGCGAGC 55802 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397540148870720