Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phyllosticta_20citricarpa_20[genbank_20GCA_5F001604955.1_202016-03-
31] 5,748 sequences; 31,127,197 total letters
Query= NC_027867.1
Length=651523
Score E
Sequences producing significant alignments: (Bits) Value
seq2360 96.9 1e-14
seq4078 86.0 3e-11
>seq2360
Length=31885
Score = 96.9 bits (106), Expect = 1e-14
Identities = 338/518 (65%), Gaps = 15/518 (3%)
Strand=Plus/Plus
Query 448640 GCGCCGTAGGACTTGAAGGAGACGCGCTCCATGTCGCCCAATCGGAGCCCGCCGTGTCGC 448699
|||||||| | ||| | || |||||||||| || || | || |||||||||| ||
Sbjct 9086 GCGCCGTACGCGATGAGGCAGTCGCGCTCCATTTCTCCGAGGCGCAGCCCGCCGTCGCGG 9145
Query 448700 -AACTTGCCCTCGGTGGGCTGCCGCGTGAGGAGCGAGTACGGTCCCCTCTGCCGCGTGTG 448758
||| | || || || |||||||||||||||| | |||||| | | ||| ||||
Sbjct 9146 GAACGT-CCTTCTGTTGGCTGCCGCGTGAGGATGGCCCGCGGTCCGCGCGCCCGGCTGTG 9204
Query 448759 CATCTTCTCCGAGGCCAGTTGCTTGAGGCTCTGGAAGAAGAAGGGCGCGTAGAACATGCG 448818
|||||| || ||| |||||||| | ||| || ||| |||| || |||| | |
Sbjct 9205 CATCTTGTCTTGCACCATGTGCTTGAGCTTTTGGTAGTAGATGGGCCCGAAGAAGACGTA 9264
Query 448819 GCACGGCATCATCTCGCCCGTCTGGCCGTCCGTAAAGATCGTCTTGCCCTCGGGCTCGAT 448878
||||| |||||||||| ||| || | || ||||| || | | |
Sbjct 9265 CGCCGGCAGGCTCTCGCCCGTGATGCCCGATGTCAGCATATCCTTGC---CGCTGTAGTT 9321
Query 448879 CATGCCCCTCTCCTCC---ATGTAGTCCATGAGCTCGGCCACGGAGAGGTCCGAAAAGGC 448935
| ||| |||| | || | ||||| |||| | ||| | | ||||||
Sbjct 9322 GAAGCCGTGCTCCAGCAGGATTTGCGACATGATTTCGGGCTTGGACCCGCC---AAAGGC 9378
Query 448936 CGTGCCGTCCTGCGGCAAGCCGCTCTCACAGCCCGTGATGGCCTGGAGGGCCTCGAGCAA 448995
||||||| ||| | ||| | | ||||| | || || ||| ||||
Sbjct 9379 TGTGCCGTATTGCAGTTCGCCCTTGACGACGCCCGCTTTTCCCGACAGCAGCTCCAGCAT 9438
Query 448996 CATGGCGTAGGTCATGCGCGACGGGTAGGCATGCGGGTTCATGATGATGT-CGGGCGTCT 449054
| || || ||||||||||||||| | | ||||||||||||||||||| ||||| |
Sbjct 9439 CTTGCCGACTGTCATGCGCGACGGGAAACCGTGCGGGTTCATGATGATGTCCGGGCAGAT 9498
Query 449055 CGCCGGCCGCGTTGAAGGGCATGTC-CTCGGGGTTGACCACCAGGCCGTTGACGCCCTTC 449113
||| |||||||||||||||| || | || | | | || ||| ||||||
Sbjct 9499 -GCCCTGGTCGTTGAAGGGCATGTCGATCTGCTCTG-CAATAATACCCACGACACCCTTC 9556
Query 449114 TGGCCGTGGCGGCTGCAGAACTTGTCCCCCTGCTCGGG 449151
|| || ||||| | |||||||||| || |||| ||
Sbjct 9557 TGACCATGGCGCGAGGAGAACTTGTCGCCGAGCTCTGG 9594
>seq4078
Length=18759
Score = 86.0 bits (94), Expect = 3e-11
Identities = 104/142 (73%), Gaps = 0/142 (0%)
Strand=Plus/Minus
Query 349074 CGTCGAGAATCTCCTTGAGTCTGGGCATGCCCAGGGTCACGTTCTTGGCCGCGACGCCGG 349133
||| |||||| ||||| || | || | ||||| || |||||||| | | ||| || |
Sbjct 9657 CGTTGAGAATTTCCTTCAGACGAGGGACACCCAGTGTAACGTTCTTTGAAGAGACACCAG 9598
Query 349134 CAAAGTGGAAGGTCTGGAGGGTCAACTGCGTGAGGGGCTCGCCGATGCACTGGCCCGCGA 349193
|||||||||| || | ||| |||| ||| || ||| || || || |||| | || |
Sbjct 9597 CAAAGTGGAACGTGTTGAGCGTCATCTGGGTAGCGGGTTCACCAATAGACTGCGCAGCCA 9538
Query 349194 GGATGCCTACCATCTCGCCGGG 349215
||| || ||||||||||||||
Sbjct 9537 GGACACCGACCATCTCGCCGGG 9516
Score = 84.2 bits (92), Expect = 9e-11
Identities = 122/170 (72%), Gaps = 3/170 (2%)
Strand=Plus/Minus
Query 351104 TCGTCTCCGTCAAAGTCGGCGTTGTAGGGCTGGGTGACCGACGGGTTGATGCCGATGGTG 351163
||||| ||||| |||||||||||||| || ||| ||||| |||||| || || ||||
Sbjct 7804 TCGTCGCCGTCGAAGTCGGCGTTGTAAGGAGAGGTAACCGAAAGGTTGAGGCGGAAGGTG 7745
Query 351164 TAGCCCCGCGGGTTGCGCCTCACGCGGTGCACCATGATGGACCCGTTGTGGAGCGTGGGC 351223
|| | || | || | |||||||| |||| |||||| | ||||| |||| |||
Sbjct 7744 GAGTACGGC--ATCACG-CGAACGCGGTGACCCATCATGGACTCCTTGTGCAGCGAAGGC 7688
Query 351224 TGGCGATTGTGGATGATGATGTCGCCATCGCGCAAGTGCCTCTCCACCTT 351273
|| || ||| ||| |||| ||||| || | ||| | ||| |||||
Sbjct 7687 TGACGGTTGAAGATAATGAAATCGCCGTCCACGATGTGACGCTCGACCTT 7638
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 2084581922062904
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |