Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Preussia_20sp._20BSL10_20[genbank_20GCA_5F001553865.1_202016-02-09] 434 sequences; 31,475,124 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq127 329 3e-85 seq157 224 8e-54 >seq127 Length=55032 Score = 329 bits (364), Expect = 3e-85 Identities = 587/853 (69%), Gaps = 18/853 (2%) Strand=Plus/Minus Query 66000 TGGGAAGGGCAAGAGATGCGAGGTTGCAGACAGCTATCTCGTCAGGAGCGGTATACTCGA 66059 ||||||| || ||||| || |||||||| || || | ||| ||||| || || ||||||| Sbjct 47886 TGGGAAGAGCGAGAGAAGCAAGGTTGCACACGGCGACCTCATCAGGTGCAGTGTACTCGA 47827 Query 66060 CAATTTCGGTGCACAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTGATTACTCTTGC 66119 || || ||||||| || || ||| |||||||||| |||| || || ||||||| Sbjct 47826 TGATCTCTGTGCACAAGTTGGAGCTGCGAATGGTGCCCAGGTTCTTCTGGTTGCTCTTGC 47767 Query 66120 GATTGCATGCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTGGGACTCAATGA 66179 | ||| ||||| ||||| | |||| | || |||||||||| || || | ||| | || Sbjct 47766 GGTTGGCAGCATCTTTGTAAAGCATGAAGGGGTTGCCGGTCTCGACCTGAGCCTCGAGGA 47707 Query 66180 TGGCGTGCCAAA------GAGCGCGTGCCTTCACCGTACGTACCGCCCTACCTTTGCGTT 66233 |||||| ||| | | ||||| || | || || ||||| | | | Sbjct 47706 TGGCGTACCAGACCTTCTGTGCGCGGATAGTCTCGCGACC-ACGGCCCTCAC-----GCT 47653 Query 66234 CGTAATGTTCGTAGAGGTGTTCGAAGGATTCACCCCATACTTCGGACAGACATGGACACT 66293 |||| | ||||| || ||||| || || | || |||| |||| || |||| Sbjct 47652 CGTACTTCTCGTACAGCGCCTCGAACTCCTCGCCGTAGACATCGGCAAGACCGGGGCACT 47593 Query 66294 TGTGTGGACACATCAGCGACCAATCACCATCCTGTTCTACACGACGCATAAATAGATCAG 66353 ||| || |||||||| | ||| | || | |||||| ||||| ||| || | || | Sbjct 47592 CGTGAGGGCACATCAGAGTCCAGTTGCCGTTCTGTTCCACACGCTTCATGAACAAGTCGG 47533 Query 66354 GTATCCAGAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAATGCCGTGATTTTTGC 66413 | ||||| |||||||||||||| || || || || || || ||||||| || |||| Sbjct 47532 GGATCCACAGGGCGTAGAAGAGGTCACGAGCACGGACTTCTTCCTTGCCGTGGTTCTTGC 47473 Query 66414 GCAAGTCGAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAACGAGC 66473 | | ||| ||||| || ||||||||| |||||||| || |||||||| || || | | Sbjct 47472 GAAGGTCCAGGAAGGGAATGATGTCGGCGTGCCATGGCTCGAGGTAGATAGCAAAGGCAC 47413 Query 66474 CCATACGTTTGCCGCCACCTTGGTCGACGTAGCGAGCGACATTGTTGAAGACACGCAACA 66533 | || ||| |||||| ||||||||||| |||||| |||||| | ||||| | || Sbjct 47412 CGGGGCGCTTGTTGCCACCCTGGTCGACGTAACGAGCGGTGTTGTTGTAAACACGAAGCA 47353 Query 66534 TCGGTACGAGCCCGTTAGATTTGCCATTGGTGCCGTCGATGGGGGATCCTCGTGCCCGTA 66593 | || ||||| ||||| || | || ||||||||| | ||| | || || || | Sbjct 47352 TGGGAACGAGACCGTTGGAGGTACCGTTGGTGCCGCCAATGTAAGCACCAGTGGCACGAA 47293 Query 66594 TATCGTGAACATTCAGACCAATACCACCGGCCGTCTTCGAG---ATGGCAGCACAATCGG 66650 | |||| || |||||||||||||| || |||| ||| ||||| ||| | | | Sbjct 47292 TGCGGTGAGTGTTGAGACCAATACCACCAGCGTTCTTGGAGATCATGGC-GCAGATTTTG 47234 Query 66651 CCACTGTCCGGAATATGCCGTCAATGGAGTCACCCTTGATGGTCAGGAGGTAGCATGAAC 66710 | |||| | | || || |||||| |||| |||| ||| | ||| |||| || Sbjct 47233 AGAGTGTC--GTAGATACCCTCAATGCTGTCATCCTTCATGTCGATAAGGAAGCAGGACG 47176 Query 66711 TAAGTTGGGGTTTGGGTGTGGCGGCCGAGAAGAGGGTGGGTGTAGCGTGCGTAAAGTAAT 66770 ||| || | | || || | || |||||| || || | || || |||||||| | Sbjct 47175 CAAGCTGTGCCTGAGGGGTACCTGCGCTGAAGAGCGTAGGGGAGGCATGTGTAAAGTACT 47116 Query 66771 GGCGAGACATGTAATTGTACGTCTCGATGACAGCATCAATGTTTTCGCCATGAATCCCGA 66830 | |||||||| ||||| |||||||| | || || |||| ||||| || || |||| Sbjct 47115 TGTTGGACATGTAGTTGTAGGTCTCGATCGCGGCCTCGATGTCGTCGCCGTGGATACCGA 47056 Query 66831 GTGCACATCGCAT 66843 ||| |||||| Sbjct 47055 CAGCAACTCGCAT 47043 >seq157 Length=447866 Score = 224 bits (248), Expect = 8e-54 Identities = 576/857 (67%), Gaps = 24/857 (3%) Strand=Plus/Plus Query 61087 ATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTG 61146 || |||| |||||||| ||||| || |||||||||||||| | |||||| | ||| | Sbjct 173680 ATCTGGCAAATGTACAAGAAGGCCGAGGCTTCCTTCTGGACAGCAGAGGAGATTGATCTC 173739 Query 61147 TCCAAAGACATGAATGACTGGGA---GCGTTT-ATCGAGCGGTGAACAACATTTCATTAA 61202 ||||| || | | |||||| | |||| | | ||| || ||| | |||||| Sbjct 173740 TCCAAGGATCTTCACGACTGGAACAAGCGTCTCAACGA-CGATGAGCGTTTCTTCATTTC 173798 Query 61203 ACATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACG 61262 ||| ||| | || ||||| ||||| || ||||| || ||||| ||||| | | || || Sbjct 173799 ACACGTGCTCGCCTTCTTCGCCGCCTCTGACGGCATTGTCAACGAGAACCTTGTCGAGCG 173858 Query 61263 TTTC-GCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCA 61321 ||| || | | ||||||| | | ||||| || || ||||||||||||||||| | Sbjct 173859 CTTCAGCTCCG-AGGTGCAGATCCCTGAGGCTCGCTGCTTCTACGGCTTCCAGATCATGA 173917 Query 61322 TGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCGGG 61381 ||||||| ||||||| |||| ||| | |||||||| || |||||||| || || Sbjct 173918 TGGAGAACATCCACTCCGAGACCTACTCCCTCCTCATCGACACCTACATCAGCGA-CGTC 173976 Query 61382 CG-GAACGTGAACGATTGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCG---GAAA 61437 || | || | | ||||| |||||||| | || || | | | || ||| Sbjct 173977 CGCCAGCGCCAGTACCTCTTCAACGCCATCGACAACATTCC--CTG-CATCCGTAAGAAG 174033 Query 61438 GCGGATTGGGC-CTTCAATTGGATCA-CCAGTACAACGGCTACATTTGGTGAACGATTGC 61495 || || ||||| || | | ||||||| | | | || | | || || | || | Sbjct 174034 GCTGACTGGGCTCTGCGA-TGGATCAGCGACGAGAA-GTCCACCTTCGCCTGCCGTCTCG 174091 Query 61496 TGGCATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGT 61555 | || ||||| | ||||| || | || ||| ||| ||||| ||| | ||||| |||| Sbjct 174092 TTGCCTTTGCTGCCGTCGAAGGCATCTTCTTCTCTGGCTCGTTCGCCTCTATCTTCTGGT 174151 Query 61556 TGAAGAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACG 61615 ||||||| ||||| || ||| | ||||| |||||| ||| ||| | || || || |||| Sbjct 174152 TGAAGAAGCGTGGCCTCATGGCTGGTCTTACCTTCTCCAACGAGCTTATCTCTCGTGACG 174211 Query 61616 AGGGCATGCATTGTGATTTTGCTGTTTTGCTATTCAAACGCTATCTGGTGAATCGTCCGT 61675 |||||||||| ||| || || |||| ||| || | || | | || | Sbjct 174212 AGGGCATGCACACTGACTTCGCCTGCCTGCTCTTCTCAC---AGCTCAAGCACAAGCCTT 174268 Query 61676 CGGAGGAGCGTGTGGGTGAG-ATTGTTCGTGAGGCGGTAACTATCGAACAGGAATTTCTG 61734 || || | || ||| || | ||||| || || ||||| ||||| || || Sbjct 174269 CGCCTGACCTCGT-ACAGAGCATCATCACCGAGGCTGTGACCATCGAGCAGGAGTTCCTC 174327 Query 61735 ACTGACGCTTTGCCCGTCTCACTCATCGGCATGAATTGTGGACTAATGTCGCAGTATATT 61794 | |||||| |||| | || |||||||||| || |||| || || ||| Sbjct 174328 TCCGACGCTCTGCCTTGTGCCCTGCTCGGCATGAACGCCAACCTCATGTGCCAATACATT 174387 Query 61795 GAATTTGTTGCCGACCGTCTGTTGGTCGATTTGGGTATGAAGCGGATCTATAATACGAAA 61854 || || || |||||||||||| | ||| | || | ||| | |||| || | | Sbjct 174388 GAGTTCGTCGCCGACCGTCTGCTCCTCGCACTCGGCAACAAGAAGTTCTACAACGCCACC 174447 Query 61855 AACCCATTTGATTTCATGGACATGATTTCGCTGGATGGCAAGACGAATTTTTTCGAGAAA 61914 ||||| || || |||||||| | || || || | |||||||| || || |||||||| Sbjct 174448 AACCCCTTCGACTTCATGGAGAACATCTCCCTTGGCGGCAAGACCAACTTCTTCGAGAAG 174507 Query 61915 CGTGTAGGCGACTATCA 61931 ||||| ||||| || || Sbjct 174508 CGTGTCGGCGAGTACCA 174524 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397565897113760