Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudocercospora_20musae_20[genbank_20GCA_5F001578225.1_202016-03-
01] 3,331 sequences; 60,439,160 total letters
Query= AAMG01000185.1
Length=266
Score E
Sequences producing significant alignments: (Bits) Value
seq955 277 3e-72
seq2100 125 1e-26
seq966 104 4e-20
>seq955
Length=10195
Score = 277 bits (306), Expect = 3e-72
Identities = 201/229 (88%), Gaps = 3/229 (1%)
Strand=Plus/Plus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
|||||||||||||||||||| ||||||| ||| |||||| |||||||||||| ||| |
Sbjct 1768 GTACAAAGGGCAGGGACGTAATCAACGCATGCT-GATGACATGCGCTTACTAGGCATT-C 1825
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATT 119
||||||||||| ||| |||||||||| |||||||||| ||||| | ||| | ||||||
Sbjct 1826 CTCGTTGAAGAGCAATAATTGCAATGCTCTATCCCCAGCACGACAGAGTTTAACAAGATT 1885
Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179
|||| ||||| ||||||||||||| |||||||| | |||||||||||||||||||
Sbjct 1886 ACCCAGACCTTCCGGCCAAGGTGATGAACTCGTTGGCTCTGTCAGTGTAGCGCGCGTGCG 1945
Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 228
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1946 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 1994
>seq2100
Length=1917
Score = 125 bits (138), Expect = 1e-26
Identities = 91/103 (88%), Gaps = 2/103 (2%)
Strand=Plus/Minus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
|||||||||||||||||||| ||||||| ||| |||||| |||||||||||| ||| |
Sbjct 118 GTACAAAGGGCAGGGACGTAATCAACGCATGCT-GATGACATGCGCTTACTAGGCATT-C 61
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGA 103
||||||||||| ||| |||||||||| |||||||||| |||||
Sbjct 60 CTCGTTGAAGAGCAATAATTGCAATGCTCTATCCCCAGCACGA 18
>seq966
Length=5440
Score = 104 bits (114), Expect = 4e-20
Identities = 76/86 (88%), Gaps = 2/86 (2%)
Strand=Plus/Minus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
|||||||||||||||||||| ||||||| || ||||||| |||||||||||| | |||
Sbjct 84 GTACAAAGGGCAGGGACGTAATCAACGCATGC-TGATGACATGCGCTTACTAGGCA-TTC 27
Query 61 CTCGTTGAAGACCAACAATTGCAATG 86
||||||||||| ||| ||||||||||
Sbjct 26 CTCGTTGAAGAGCAATAATTGCAATG 1
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 751975733665
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |