Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudocercospora_20musae_20[genbank_20GCA_5F001578225.1_202016-03- 01] 3,331 sequences; 60,439,160 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq955 277 3e-72 seq2100 125 1e-26 seq966 104 4e-20 >seq955 Length=10195 Score = 277 bits (306), Expect = 3e-72 Identities = 201/229 (88%), Gaps = 3/229 (1%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| ||||||| ||| |||||| |||||||||||| ||| | Sbjct 1768 GTACAAAGGGCAGGGACGTAATCAACGCATGCT-GATGACATGCGCTTACTAGGCATT-C 1825 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATT 119 ||||||||||| ||| |||||||||| |||||||||| ||||| | ||| | |||||| Sbjct 1826 CTCGTTGAAGAGCAATAATTGCAATGCTCTATCCCCAGCACGACAGAGTTTAACAAGATT 1885 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 |||| ||||| ||||||||||||| |||||||| | ||||||||||||||||||| Sbjct 1886 ACCCAGACCTTCCGGCCAAGGTGATGAACTCGTTGGCTCTGTCAGTGTAGCGCGCGTGCG 1945 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 228 ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1946 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 1994 >seq2100 Length=1917 Score = 125 bits (138), Expect = 1e-26 Identities = 91/103 (88%), Gaps = 2/103 (2%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| ||||||| ||| |||||| |||||||||||| ||| | Sbjct 118 GTACAAAGGGCAGGGACGTAATCAACGCATGCT-GATGACATGCGCTTACTAGGCATT-C 61 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGA 103 ||||||||||| ||| |||||||||| |||||||||| ||||| Sbjct 60 CTCGTTGAAGAGCAATAATTGCAATGCTCTATCCCCAGCACGA 18 >seq966 Length=5440 Score = 104 bits (114), Expect = 4e-20 Identities = 76/86 (88%), Gaps = 2/86 (2%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| ||||||| || ||||||| |||||||||||| | ||| Sbjct 84 GTACAAAGGGCAGGGACGTAATCAACGCATGC-TGATGACATGCGCTTACTAGGCA-TTC 27 Query 61 CTCGTTGAAGACCAACAATTGCAATG 86 ||||||||||| ||| |||||||||| Sbjct 26 CTCGTTGAAGAGCAATAATTGCAATG 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751975733665