Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudocercospora_20musae_20[genbank_20GCA_5F001578225.1_202016-03- 01] 3,331 sequences; 60,439,160 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq966 859 0.0 seq2100 841 0.0 seq955 834 0.0 seq2493 138 5e-30 seq2765 109 2e-21 >seq966 Length=5440 Score = 859 bits (952), Expect = 0.0 Identities = 589/658 (90%), Gaps = 7/658 (1%) Strand=Plus/Plus Query 26 GAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTC 85 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 949 GAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTC 1008 Query 86 TTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGA 145 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 1009 TTCTAAAGCTAAATACTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGA 1068 Query 146 AAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCA 205 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 1069 AAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCCCGCA 1128 Query 206 ACCAGACTTGCCCGCAGTTGCTCAACCGGCCCCTCGGCCGGTGCACTCTTCTGCGGTCAG 265 ||||||||| | || | || || | || | | ||||| |||| | || || || Sbjct 1129 ACCAGACTTTGCGGC-GGTGTTCGGCTGGTCTTCTGACCGGTTTACTC-ACCGCCGTGAG 1186 Query 266 GCCAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTCGGGGGGT 325 |||| |||| || || | | |||| ||| || ||||||| || |||||||||| || Sbjct 1187 GCCATCATCGTCTGGGACCGCTGGAT-AAGACCTGAGGAATGTAGCTCCCTTCGGGGTGT 1245 Query 326 GTTATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGCTCCGGCTAGGATG 385 |||||||| |||| |||| || || || | ||||||||||||||||| |||||| Sbjct 1246 ATTATAGCCTCTGGTG--ATGCAGCGCGTCTCGGGCGAGGTCCGCGCTCCGGCAAGGATG 1303 Query 386 CTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTAT 445 ||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||| Sbjct 1304 ATGGCGTAATGGTTGTCGGCGGCCCGTCTTGAAACACGGACCAAGGAGTCTAACATCTAT 1363 Query 446 GCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGGTGGGAACCCGT 505 ||||||||| |||| |||||||| | |||||||||||||| ||||||||||||||||| | Sbjct 1364 GCGAGTGTTCGGGTATCAAACCCCTACGCGTAATGAAAGTAAACGGAGGTGGGAACCCTT 1423 Query 506 GAGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTG 565 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 1424 --GGGTGCACCATCGACCGATCCTGATGTCCTCGGATGGATTTGAGTAAGAGCATAGCTG 1481 Query 566 TTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGT 625 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1482 TTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGT 1541 Query 626 GGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct 1542 GGAGGCTCGCAGCGGTTCTGACGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 1599 >seq2100 Length=1917 Score = 841 bits (932), Expect = 0.0 Identities = 588/658 (89%), Gaps = 12/658 (2%) Strand=Plus/Plus Query 28 AGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTT 87 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1003 AGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTT 1062 Query 88 CTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAA 147 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1063 CTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAA 1122 Query 148 AGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAAC 207 |||||||||||||||||||||||||||||||||||||||| ||||||||| | ||||||| Sbjct 1123 AGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTAAAAGGGAAGGGATTGCAAC 1182 Query 208 CAGACTTGCCCGCAGTTGCTCAACCGGCCCCTCGGCCGGTGCACTCTTCTGCGGT-CAGG 266 ||||||||| ||| | || || |||| | | ||||| |||| | ||| | |||| Sbjct 1183 CAGACTTGCTCGC-GGTGTTCCGCCGGTCTTCTGACCGGTCTACTC-GCCGCGTTGCAGG 1240 Query 267 CCAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTCGGGGGGTG 326 |||||||| || | || | |||| ||| | ||||||| || |||| ||| ||| Sbjct 1241 CCAGCATCGTCTGGTGCCGCTGGAT-AAGACTTGAGGAATGTAGCTCCCT--CGGGAGTG 1297 Query 327 TTATAGCCCGGGGTGGAATGCGGCCCGC-CTGGACTGAGGTCCGCGCTCCGGCTAGGATG 385 |||||||| ||| |||| || || | || | |||||||||||| ||||||||||| Sbjct 1298 TTATAGCCTCTTGTG--ATGCAGCGAGCGCCGGGC-GAGGTCCGCGCTTCGGCTAGGATG 1354 Query 386 CTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTAT 445 ||||||||||||| |||| | |||||||||| |||||||||||||||||||||||||||| Sbjct 1355 CTGGCGTAATGGTCGTAATCCGCCCGTCTTGAAACACGGACCAAGGAGTCTAACATCTAT 1414 Query 446 GCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGGTGGGAACCCGT 505 ||||||||| ||||||||||||| | ||||||||||||||||||||||||| ||||| Sbjct 1415 GCGAGTGTTCGGGTGTCAAACCCCTACGCGTAATGAAAGTGAACGGAGGTGAGAACC--G 1472 Query 506 GAGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTG 565 | |||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1473 CAAGGTGCATCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTG 1532 Query 566 TTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGT 625 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1533 TTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGT 1592 Query 626 GGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct 1593 GGAGGCTCGCAGCGGTTCTGACGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 1650 >seq955 Length=10195 Score = 834 bits (924), Expect = 0.0 Identities = 582/656 (89%), Gaps = 7/656 (1%) Strand=Plus/Minus Query 28 AGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTT 87 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 907 AGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTT 848 Query 88 CTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAA 147 ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 847 CTAAAGCTAAATACCGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAA 788 Query 148 AGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAAC 207 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 787 AGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAAC 728 Query 208 CAGACTTGCCCGCAGTTGCTCAACCGGCCCCTCGGCCGGTGCACTCTTCTGCGGTCAGGC 267 ||||||| || | || || | || | | ||||| |||| || | | |||| Sbjct 727 CAGACTTCGTAGC-GATGTTCCGCTGGTCTTCTGACCGGTCTACTCATC-GTCGCGAGGC 670 Query 268 CAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTCGGGGGGTGT 327 || |||| || || | | |||| ||| || ||||||| || || ||||| |||| Sbjct 669 CAACATCGTCTGGGACCGCTGGAT-AAGACCTAAGGAATGTAGCTTCCCTCGGGAAGTGT 611 Query 328 TATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGCTCCGGCTAGGATGCT 387 ||||||| | |||| |||| || | || | |||||||||||| |||| |||||| | Sbjct 610 TATAGCCTGTGGTG--ATGCAGCGTGTCTCGGGCGAGGTCCGCGCTTCGGCAAGGATGTT 553 Query 388 GGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATGC 447 |||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||| Sbjct 552 GGCGTAATGGTTGTCAGCGGCCCGTCTTGAAACACGGACCAAGGAGTCTAACATCTATGC 493 Query 448 GAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGGTGGGAACCCGTGA 507 ||||||| ||||||||||||| | ||||||||||||||||||||||||||||| | | Sbjct 492 GAGTGTTCGGGTGTCAAACCCCTACGCGTAATGAAAGTGAACGGAGGTGGGAAGC--GCA 435 Query 508 GGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTT 567 | ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct 434 AGCTGCACCATCGACCGATCCTGATGTCCTCGGATGGATTTGAGTAAGAGCATAGCTGTT 375 Query 568 GGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGG 627 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 374 GGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGG 315 Query 628 AGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct 314 AGGCTCGCAGCGGTTCTGACGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 259 >seq2493 Length=1092 Score = 138 bits (152), Expect = 5e-30 Identities = 78/79 (99%), Gaps = 0/79 (0%) Strand=Plus/Minus Query 605 GAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCA 664 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 1092 GAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGACGTGCAAATCGATCGTCA 1033 Query 665 AATTTGGGTATAGGGGCGA 683 ||||||||||||||||||| Sbjct 1032 AATTTGGGTATAGGGGCGA 1014 >seq2765 Length=55792 Score = 109 bits (120), Expect = 2e-21 Identities = 71/77 (92%), Gaps = 2/77 (3%) Strand=Plus/Minus Query 496 GGGAACCCGTGAGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAG 555 ||||||| || ||||||||||||||||||| ||||||| ||||||||||||||||||| Sbjct 43195 GGGAACCTTTG--GGTGCACCATCGACCGATCGTGATGTCCTCGGATGGATTTGAGTAAG 43138 Query 556 AGCATAGCTGTTGGGAC 572 ||||||||||||||||| Sbjct 43137 AGCATAGCTGTTGGGAC 43121 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079928550050