Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudocercospora_20musae_20[genbank_20GCA_5F001578225.1_202016-03- 01] 3,331 sequences; 60,439,160 total letters Query= AAMG01000538.1 Length=248 Score E Sequences producing significant alignments: (Bits) Value seq2931 84.2 3e-14 seq2549 84.2 3e-14 seq84 75.2 2e-11 >seq2931 Length=51645 Score = 84.2 bits (92), Expect = 3e-14 Identities = 70/86 (81%), Gaps = 0/86 (0%) Strand=Plus/Minus Query 140 TGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCTTAACCACAGTTCAC 199 |||||| |||| |||||||||||||| | || |||||||| |||||||| | ||| | Sbjct 49825 TGGCACACCTTATCCCGAAGTTACGGAGTCAATTTGCCGAGTTCCTTAATGATTGTTATC 49766 Query 200 CCGAACGCCTTAGTATTCTCTACCTG 225 | |||||||| ||||||||||| || Sbjct 49765 TCAAACGCCTTTGTATTCTCTACTTG 49740 >seq2549 Length=918 Score = 84.2 bits (92), Expect = 3e-14 Identities = 70/86 (81%), Gaps = 0/86 (0%) Strand=Plus/Minus Query 140 TGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCTTAACCACAGTTCAC 199 |||||| |||| |||||||||||||| | || |||||||| |||||||| | ||| | Sbjct 707 TGGCACACCTTATCCCGAAGTTACGGAGTCAATTTGCCGAGTTCCTTAATGATTGTTATC 648 Query 200 CCGAACGCCTTAGTATTCTCTACCTG 225 | |||||||| ||||||||||| || Sbjct 647 TCAAACGCCTTTGTATTCTCTACTTG 622 >seq84 Length=13005 Score = 75.2 bits (82), Expect = 2e-11 Identities = 68/86 (79%), Gaps = 0/86 (0%) Strand=Plus/Minus Query 140 TGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCTTAACCACAGTTCAC 199 ||| || |||| |||||||||||||| | || |||||||| |||||||| | ||| | Sbjct 7064 TGGTACACCTTATCCCGAAGTTACGGAGTCAATTTGCCGAGTTCCTTAATGATTGTTATC 7005 Query 200 CCGAACGCCTTAGTATTCTCTACCTG 225 |||||||| ||||||||||| || Sbjct 7004 TTAAACGCCTTTGTATTCTCTACTTG 6979 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694377592363