Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudocercospora_20musae_20[genbank_20GCA_5F001578225.1_202016-03- 01] 3,331 sequences; 60,439,160 total letters Query= AAMG01000636.1 Length=426 Score E Sequences producing significant alignments: (Bits) Value seq1777 98.7 3e-18 seq2931 96.9 9e-18 >seq1777 Length=2644 Score = 98.7 bits (108), Expect = 3e-18 Identities = 190/279 (68%), Gaps = 10/279 (4%) Strand=Plus/Plus Query 10 ACTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCCATC 69 |||| |||| ||||| ||| ||||||||||||| | | |||||||| ||| Sbjct 55 ACTGTATCTGCACAGTTATTCCAATTTCACTGAGACAATCATTGAGACAGCTGTTGTATC 114 Query 70 GTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCG 129 |||| ||||| |||| | | | | ||| | | || || ||| ||||||||||||||| Sbjct 115 GTTAAATCATTCATGCAAGACCGCATTTAACGGCCAGGGTATTCCGCTACCTTAGGACCC 174 Query 130 TTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGA--------GCTTCGCGTTAG 181 | || | || ||||||| || | |||| ||| |||| | || | | || Sbjct 175 TCATCGGTAAGGCCGCCATTGATTGGGGTTTCCTTCAAAACCTAGCCTACTAAGATTCAG 234 Query 182 CTAACCCCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTT- 240 |||| ||| |||||| || || ||||||| |||||| | |||| | | || Sbjct 235 CTAAGAAAATCCGTTAACCAGCCAACATCGGGCAGAAATCACACTCAATACTTTGATTTA 294 Query 241 TCGTGTT-TGCAGAGTGCTGTGTTTTTAATAAACAGTCG 278 | | || |||| |||||| |||||| | |||||||||| Sbjct 295 TAATCTTATGCAAAGTGCTTTGTTTTAATTAAACAGTCG 333 >seq2931 Length=51645 Score = 96.9 bits (106), Expect = 9e-18 Identities = 276/421 (66%), Gaps = 30/421 (7%) Strand=Plus/Minus Query 10 ACTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCCATC 69 |||| |||| ||||| ||| ||||||||||||| | | |||||||| ||| Sbjct 50145 ACTGTATCTGCACAGTTATTCCAATTTCACTGAGACAATCATTGAGACAGCTGTTGTATC 50086 Query 70 GTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCG 129 |||| ||||| |||| | | | | ||| | | || || ||| ||||||||||||||| Sbjct 50085 GTTAAATCATTCATGCAAGACCGCATTTAACGGCCAGGGTATTCCGCTACCTTAGGACCC 50026 Query 130 TTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAA----GAGCTTCGCGTTA----G 181 | || | || ||||||| || | |||| ||| |||| ||| | | |||| Sbjct 50025 TCATCGGTAAGGCCGCCATTGATTGGGGGTTCCTTCAAAACCTAGCCTAGTGTTATTTGA 49966 Query 182 CTAACCCCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTT- 240 |||| || |||||| || || |||||| |||||| | |||| | | || Sbjct 49965 CTAAGAAAATTCGTTAACCAGCCAACATTGGGCAGAAATCACACTCAATACTTTGATTTA 49906 Query 241 TCGTGTT-TGCAGAGTGCTGTGTTTTTAATAAACAGTCG--CAGCGGCCTGGTATCTTCG 297 | | || |||| |||||| |||||| | |||||||||| || | | | ||| Sbjct 49905 TTATCTTATGCAAAGTGCTTTGTTTTAATTAAACAGTCGTACAACACCATTTTAT----- 49851 Query 298 ACCGGCATGAGCTTACGGAGCAAGTCCTTCACCCTCACCGGCGCACCTTCTCCCGAAGTT 357 | | ||| | | ||| | | | ||| |||||| |||||||||| Sbjct 49850 ----GTCTCCTCTT--------ATTACTTAATAAT-AATGGCACACCTTATCCCGAAGTT 49804 Query 358 ACGGTGCCTTTTTGCCTAGTTCCTTCCCCCGAGTTCTCTCAAGCGCCTTGGTATTCTCTA 417 |||| | | |||||| |||||||| ||| |||||| |||||| |||||||||| Sbjct 49803 ACGGAGTCAATTTGCCGAGTTCCTTAATGATTGTTATCTCAAACGCCTTTGTATTCTCTA 49744 Query 418 C 418 | Sbjct 49743 C 49743 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1260758002752