Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudocercospora_20musae_20[genbank_20GCA_5F001578225.1_202016-03-
01] 3,331 sequences; 60,439,160 total letters
Query= AAMG01001382.1
Length=124
Score E
Sequences producing significant alignments: (Bits) Value
seq966 96.9 2e-18
seq955 96.9 2e-18
seq2100 91.5 9e-17
>seq966
Length=5440
Score = 96.9 bits (106), Expect = 2e-18
Identities = 76/86 (88%), Gaps = 4/86 (5%)
Strand=Plus/Minus
Query 39 TCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAG 98
|||||| | |||||| ||||||| || ||||||||| ||||||||||| ||||||||||
Sbjct 133 TCCGAAGGC-CTCACTGAGCCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAG 77
Query 99 GGCAGGGACGTAATACAACGCAAGCT 124
|||||||||||||| ||||||| |||
Sbjct 76 GGCAGGGACGTAAT-CAACGCATGCT 52
>seq955
Length=10195
Score = 96.9 bits (106), Expect = 2e-18
Identities = 76/86 (88%), Gaps = 4/86 (5%)
Strand=Plus/Plus
Query 39 TCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAG 98
|||||| | |||||| ||||||| || ||||||||| ||||||||||| ||||||||||
Sbjct 1719 TCCGAAGGC-CTCACTGAGCCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAG 1775
Query 99 GGCAGGGACGTAATACAACGCAAGCT 124
|||||||||||||| ||||||| |||
Sbjct 1776 GGCAGGGACGTAAT-CAACGCATGCT 1800
>seq2100
Length=1917
Score = 91.5 bits (100), Expect = 9e-17
Identities = 75/86 (87%), Gaps = 4/86 (5%)
Strand=Plus/Minus
Query 39 TCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAG 98
|||||| | ||||| ||||||| || ||||||||| ||||||||||| ||||||||||
Sbjct 167 TCCGAAGGC-CTCACCGAGCCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAG 111
Query 99 GGCAGGGACGTAATACAACGCAAGCT 124
|||||||||||||| ||||||| |||
Sbjct 110 GGCAGGGACGTAAT-CAACGCATGCT 86
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 300790606580
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |