Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudocercospora_20musae_20[genbank_20GCA_5F001578225.1_202016-03-
01] 3,331 sequences; 60,439,160 total letters
Query= AAMG01002236.1
Length=287
Score E
Sequences producing significant alignments: (Bits) Value
seq966 293 4e-77
seq1284 232 1e-58
seq167 226 5e-57
>seq966
Length=5440
Score = 293 bits (324), Expect = 4e-77
Identities = 235/278 (85%), Gaps = 4/278 (1%)
Strand=Plus/Plus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
||||||||||||||||||| |||||| ||||||||||||||||||||| |||| ||||||
Sbjct 4407 GTACGAGAGGAACCGCGGA-TTCAGA-TAATTGGTTTTTGCGGCTGTCCGACCGGGCAGT 4464
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120
||||||||||||||||||||||||| || ||||||||||||||||| |||||||||||||
Sbjct 4465 GCCGCGAAGCTACCATCTGCTGGATAATAGCTGAACGCCTCTAAGTTAGAATCCATGCCA 4524
Query 121 GAACGGGGTGATTCTCTCCTGCACATCGTAGTCGGATACGAATAGGCTTCGGCCCCGAAC 180
||||||| |||| ||||| |||| ||||| |||||||||||||||||||||||| ||
Sbjct 4525 GAACGGGACGATTTTCTCCAGCACGTCGTACGAGGATACGAATAGGCTTCGGCCCCGGAC 4584
Query 181 CTTAGCAGGCCGGCAACGGGCGTCCCGCGGAAGCGCGGGGCGCTCAGCTGGCGGATTGCA 240
||||||||||| ||| || || |||| || | | | | |||||||| |||
Sbjct 4585 CTTAGCAGGCC-ATAACTCCTCTCTCGTAGAAGTCGGGAGAGGT-AATTGGCGGATAGCA 4642
Query 241 ATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278
|||| || |||| ||||| |||||||||||||||||
Sbjct 4643 ATTTGACAGCGCGCTGGGATGAATCCTTTGCAGACGAC 4680
>seq1284
Length=4061
Score = 232 bits (256), Expect = 1e-58
Identities = 153/167 (92%), Gaps = 2/167 (1%)
Strand=Plus/Plus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
|||||||||||||||||| |||||| ||||||||||||||||||||| |||| ||||||
Sbjct 204 GTACGAGAGGAACCGCGGT-TTCAGA-TAATTGGTTTTTGCGGCTGTCCGACCGGGCAGT 261
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 262 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 321
Query 121 GAACGGGGTGATTCTCTCCTGCACATCGTAGTCGGATACGAATAGGC 167
||||||| ||| |||||| |||| | ||| |||||| ||||||||
Sbjct 322 GAACGGGACGATCCTCTCCAGCACGCCTTAGGCGGATAAGAATAGGC 368
>seq167
Length=11965
Score = 226 bits (250), Expect = 5e-57
Identities = 152/167 (91%), Gaps = 2/167 (1%)
Strand=Plus/Minus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
|||||||||||||||||| |||||| ||||||||||||||||||||| |||| ||||||
Sbjct 11963 GTACGAGAGGAACCGCGGT-TTCAGA-TAATTGGTTTTTGCGGCTGTCCGACCGGGCAGT 11906
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 11905 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 11846
Query 121 GAACGGGGTGATTCTCTCCTGCACATCGTAGTCGGATACGAATAGGC 167
||||||| ||| ||||| |||| | ||| |||||| ||||||||
Sbjct 11845 GAACGGGACGATCCTCTCTAGCACGCCTTAGGCGGATAAGAATAGGC 11799
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 819173565184
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |