Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudocercospora_20musae_20[genbank_20GCA_5F001578225.1_202016-03- 01] 3,331 sequences; 60,439,160 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq1779 271 6e-68 seq2619 233 2e-56 >seq1779 Length=148467 Score = 271 bits (300), Expect = 6e-68 Identities = 631/938 (67%), Gaps = 24/938 (3%) Strand=Plus/Minus Query 66014 GATGCGAGGTTGCAGACAGCTATCTCGTCAGGAGCGGTATACTCGACAATTTCGGTGCAC 66073 || || |||||||||||||| | ||| || ||||| | ||||||| || || ||||| Sbjct 97864 GAAGCAAGGTTGCAGACAGCCACCTCATCTGGAGCAGAGTACTCGATGATCTCAGTGCAG 97805 Query 66074 AGATTACTGCAGCGTATGGTGCCCAAATTCTGTTGATTACTCTTGCGATTGCATGCATCC 66133 || ||| | ||| || || || | |||| || || |||||||| ||||| |||||| Sbjct 97804 AGGTTAGAACTGCGGATTGTACCAAGGTTCTTCTGGTTGCTCTTGCGGTTGCAAGCATCC 97745 Query 66134 TTGTACATCATGTACGGAGTGCCGGTCTCAACTTGGGACTCAATGATGGCGTGCCAAA-- 66191 ||||| | ||| | || ||||||||| || | ||||| ||||| | ||| | Sbjct 97744 TTGTAAAGGATGAAAGGGCCGCCGGTCTCCGTCTGAGCCTCAAGAATGGCATACCAGATC 97685 Query 66192 ----GAGCGCGTGCCTTCAC-CGTACGTACCGCCCTACCTTTGCGTTCGTAATGTTCGTA 66246 | ||||| | || | || | || |||| |||| ||||| || ||||| Sbjct 97684 TTCTGGGCGCGAACAGTCTCGCGGCC--ACGACCCT-CCTTC----TCGTACTGCTCGTA 97632 Query 66247 GAGGTGTTCGAAGGATTCACCCCATACTTCGGACAGACATGGACACTTGTGTGGACACAT 66306 ||| | |||||| || || | || || | |||| || |||| | || ||||| Sbjct 97631 GAGCTTCTCGAAGTCCTCGCCATAAACATCTGCGAGACCAGGGCACTCATTCGGGCACAT 97572 Query 66307 CAGCGACCAATCACCATCCTGTTCTACACGACGCATAAATAGATCAGGTATCCAGAGGGC 66366 || | ||| || || | || || ||||| ||| || ||||| || ||||| || || Sbjct 97571 GAGGGTCCACTCGCCGTTCTCCTCAACACGCTTCATGAACAGATCCGGGATCCAAAGTGC 97512 Query 66367 GTAGAAGAGATCGCGTGCTCGTTGCTCCTCAATGCCGTGATTTTTGCGCAAGTCGAGGAA 66426 | |||| || ||||| || || |||||| |||| || || ||||| | || | ||| Sbjct 97511 GAAGAAAAGGTCGCGGGCGCGCACCTCCTCTTTGCCATGGTTCTTGCGGAGATCCATGAA 97452 Query 66427 CTCAAAGATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCC 66486 | | | || || |||||||| || ||||| ||||| || | || || ||| Sbjct 97451 TGCCAGAACATCAGCGTGCCATGGCTCGAGGTAAATGGCAAAGGCACCGGGGCGCTTGTT 97392 Query 66487 GCCACCTTGGTCGACGTAGCGAGCGACATTGTTGAAGACACGCAACATCGGTACGAGCCC 66546 |||||| ||||| ||||||||||| |||||| ||||||||| ||| || || || || Sbjct 97391 GCCACCCTGGTCAACGTAGCGAGCAGTGTTGTTGTAGACACGCAGCATAGGAACCAGTCC 97332 Query 66547 GTTAGATTTGCCATTGGTGCCGTCGATGGGGGATCCTCGTGCCCGTATATCGTGAACATT 66606 ||| || |||| || ||||| ||||| || || || || || |||||| || Sbjct 97331 GTTGGACGTGCCGTTCGTGCCTCCGATGTACGAGCCAGTCGCACGGATGCGGTGAACGTT 97272 Query 66607 CAGACCAATACCACCGGCCGTCTTCGAGATGGCAGCACAA-TC-GGCCACTGTCCGGAAT 66664 |||||||| || || || |||| ||||| ||||||| || | | |||| | | Sbjct 97271 GAGACCAATGCCTCCAGCGTTCTTGGAGATCATAGCACAAGTCTTGAGAGTGTC--GTAG 97214 Query 66665 ATGCCGTCAATGGAGTCACCCTTGATGGTCAGGAGGTAGCATGAACTAAGTTGGGGTTTG 66724 || || |||||| ||| |||| ||| | | | ||||||| || || | || Sbjct 97213 ATACCCTCAATGCTGTCGTCCTTCATGTCAACCAAGAAGCATGAGGCGAGCTGTGCATTA 97154 Query 66725 GGTGTGGCGGCCGAGAAGAGGGTGGGTGTAGCGTGCGTAAAGTAATGGCGAGACATGTAA 66784 || || | || || || ||||| | ||||| || ||||| | | |||||||| Sbjct 97153 GGCGTACCAGCGCTAAAAAGCGTGGGCGACGCGTGTGTGAAGTACTTGTTGGACATGTAG 97094 Query 66785 TTGTACGTCTCGATGACAGCATCAATGTTTTCGCCATGAATCCCGAGTG-CACATCGCAT 66843 ||||| ||||| || |||| ||||||| ||||| || || || | | |||| ||||| Sbjct 97093 TTGTAGGTCTCAATAGCAGCCTCAATGTCCTCGCCGTGGATACCAACAGCCACA-CGCAT 97035 Query 66844 CAGGAGGTATTGAGGCCGTTCGACCAGCCGATCCTTGATATGC--ATTAAGTAGGAGCGT 66901 | | | || || || || || || || | | |||| | | ||| || || Sbjct 97034 GATCATTTGCTGCGGTCGCTC-TGCAACCTTGCCGTCA-ATGCGGAGCAGGTACGATCGC 96977 Query 66902 TCCAGGGTCTTGATACCAAAGTACGAGTAATTGAAATC 66939 |||| ||||||| ||||||||| ||| ||||| || Sbjct 96976 TCCAACGTCTTGAAGCCAAAGTACTGGTAGTTGAAGTC 96939 Score = 105 bits (116), Expect = 5e-18 Identities = 331/499 (66%), Gaps = 24/499 (5%) Strand=Plus/Minus Query 65078 TCGACCGTGAACTGGATCGCATTAGCAGCCGCCTTGGTCCTAAGATAGTACATGCCGGTC 65137 ||||| |||||||| |||| | ||| ||| |||| | || ||||||||||| ||| Sbjct 98782 TCGACAGTGAACTGAATCGGTGCCGAAGCAGCCATGGTTCGGAGGTAGTACATGCCAGTC 98723 Query 65138 TTGAGGCCAGCACGCCAAGCATAGAAATGCATCGATGATAATTTTGCATA-ATTCGGCTC 65196 || || ||| ||| || || ||||| | || | || |||| | | | ||||| Sbjct 98722 TTCAGACCAAGTTTCCAGCCAGTAAAGTGCAT-GCTGGTGATCTTGCCCATAGTGGGCTC 98664 Query 65197 GGCCACATGCATATTCAACGACTGACTCTGATCGATGTAACG-ACCACGATCTGCAGCCA 65255 || || || ||||| |||| |||||||||| |||| ||||||||| || |||| Sbjct 98663 CTTCATGTGGATGTTCAAGCTCTGAGACTGATCGATG-AACGCACCACGATCGGCGGCCA 98605 Query 65256 TGTCAATGATACGACGTCCCGA--TATCTCCCAGACGGTCTTGTAC-AGGC---GACGTA 65309 | | || |||| || | || ||||||||||| ||||||||| | || || || Sbjct 98604 TCTGAACGATAGTTCG--CTGACTGATCTCCCAGACAGTCTTGTACAATGCCTTGAGGT- 98548 Query 65310 CCTCAATTGGAATCTCCTCAATGTCCTGGACTGAACCACGACGTGCAATAATGCGATTAC 65369 | || || || | |||| || | || |||| | ||||| ||||| || Sbjct 98547 CGTC---CGGGATGTTTGGAATGCGTTGAATAGAGCCACCATCGGCAATGATGCGGTTCT 98491 Query 65370 GCATCGACTCTGACCACAAACCCAAATCGATAAGAT-GTTG---AACCAAGTGACGATTG 65425 ||| ||| ||||| | ||| |||| || | ||| | ||||| | ||| Sbjct 98490 TCATGTTCTCGGACCAGAGACCACGGTCGACGAGGTCCTTGAGCAGCCAAG----GGTTG 98435 Query 65426 ATGACTTGGAACTCGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGGGTTCA 65485 | || ||||||||||| | || ||||| || ||||||||| ||| || || Sbjct 98434 ACTACCTGGAACTCGCCAGCCAACACACGGCGAGAGTAGATGTTGCTAGTGTATGGCTCG 98375 Query 65486 AAGGATTCAGTGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGACCAAC 65545 ||| | || || ||| | || |||| ||| || ||||| ||||| ||||| || | Sbjct 98374 AAGCACTCGTTGAAGCCCATGATCTGGGAAGTGGAAGCAGTCGGCATTGGAGCCACGAGA 98315 Query 65546 AATGAGTTTCGCAATCCGT 65564 | |||||||||| |||| Sbjct 98314 AGGGAGTTTCGCACACCGT 98296 >seq2619 Length=45072 Score = 233 bits (258), Expect = 2e-56 Identities = 576/856 (67%), Gaps = 22/856 (3%) Strand=Plus/Plus Query 61087 ATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTG 61146 || |||| |||||||| ||||| ||||| ||||||||||| | |||||| | ||| || Sbjct 29184 ATATGGCAGATGTACAAGAAGGCCGAAGCATCCTTCTGGACCGCTGAGGAGATTGATCTG 29243 Query 61147 TCCAAAGACATGAATGACTGGGAGCGTTTATCGAGCGGT---GAACAACATTTCATTAAA 61203 ||||| ||| | | |||||| | | || || | || | | | ||||| | Sbjct 29244 TCCAAGGACCTTCACGACTGGAACAAGAGACTGAACGATGACGAGCGATACTTCATCTCA 29303 Query 61204 CATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACGT 61263 ||||| | || ||||| ||||| || ||||| || ||||||||||| | | || || Sbjct 29304 CATGTCCTTGCTTTCTTCGCCGCATCTGACGGAATTGTCAATGAGAACCTGGTTGAGCGC 29363 Query 61264 TTC-GCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCAT 61322 ||| ||| || || || | | || || || || |||||||| |||||||| || Sbjct 29364 TTCAGCG-GTGAAGTACAGATACCCGAAGCACGATGCTTCTACGGATTCCAGATCATGAT 29422 Query 61323 GGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCGGGC 61382 |||||| |||||||||| | ||| | || ||||| || |||||||| || | Sbjct 29423 GGAGAACATCCACTCGGAAACATACTCCCTGCTTATCGACACCTACATCAGCGAACCCAA 29482 Query 61383 GGAACGTGAACGATTGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCG---GAAAGC 61439 | | || | | ||||| |||||||| | || || || | || ||| || Sbjct 29483 GCAGCGATCATATCTCTTCAACGCCATCGACAACATCCC--ATGT-ATCCGTAAGAAGGC 29539 Query 61440 GGATTGGGCCTTCAATTGGATCAC-CAGTACAACGGCTACATTTGGTGAACGATTGCTGG 61498 || ||||| || |||||| | | | ||| | || |||| |||||| | | Sbjct 29540 TGACTGGGCATTGCGATGGATCTCTGACAAGAAC-TCGACTTTTGCCTGCCGATTGATCG 29598 Query 61499 CATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGA 61558 | || || | |||||||| | || ||| ||| || || || | ||||| ||||||| Sbjct 29599 CCTTCGCTGCCGTCGAGGGCATCTTCTTCTCTGGTTCTTTCGCATCCATCTTCTGGTTGA 29658 Query 61559 AGAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAGG 61618 |||| ||||| || ||||||||||| || ||| ||||| ||||| || || ||||||| Sbjct 29659 AGAAGCGTGGCCTCATGCCCGGTCTTACATTCTCGAATGAATTGATCTCGCGTGACGAGG 29718 Query 61619 GCATGCATTGTGATTTTGCTGTTTTGCTATTCAAACGCTATCTGGTGAA-TCGTCCGTCG 61677 ||||||| || || || |||| ||| | | || ||| | | | || Sbjct 29719 GCATGCACACAGACTTCGCATGCCTGCTGTTCTCTC---ACCTCAAGAACAAGCCAGACG 29775 Query 61678 GAGGAGCGTGTGGGTGAGATTGTTCG-TGAGGCGGTAACTATCGAACAGGAATTTCTGAC 61736 | | | || | ||| | ||| ||| || || | || || || ||||| || || Sbjct 29776 CATCA-CTCGT-GCAGAGCATCATCGTTGAAGCTGTTGCGATTGAGCAAGAATTCCTCAC 29833 Query 61737 TGACGCTTTGCCCGTCTCACTCATCGGCATGAATTGTGGACTAATGTCGCAGTATATTGA 61796 || || | || ||| ||| ||||||||||| | || |||| ||||| || || Sbjct 29834 AGATGCGCTCCCAGTCATGCTCCTCGGCATGAATGCTAAGCTCATGTGCCAGTACATCGA 29893 Query 61797 ATTTGTTGCCGACCGTCTGTTGGTCG-ATTTGGGTATGAAGCGGATCTATAATACGAAAA 61855 ||||| || |||||||||||| | | | | ||| || || | |||| || | | | Sbjct 29894 GTTTGTCGCGGACCGTCTGTTGTTGGCACTCGGGAAT-CAGAAGTTCTACAACGCCACCA 29952 Query 61856 ACCCATTTGATTTCATGGACATGATTTCGCTGGATGGCAAGACGAATTTTTTCGAGAAAC 61915 ||||||| ||||||||||| | ||||| || | |||||||| || || |||||||| | Sbjct 29953 ACCCATTCGATTTCATGGAGAACATTTCTCTAGGCGGCAAGACCAACTTCTTCGAGAAGC 30012 Query 61916 GTGTAGGCGACTATCA 61931 |||| || ||||| || Sbjct 30013 GTGTTGGTGACTACCA 30028 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397551860105840