Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20pannorum_20var._20pannorum_20[genbank_20GCA_5F001 630605.1_202016-04-25] 599 sequences; 30,534,672 total letters Query= NC_032108.1 Length=589068 Score E Sequences producing significant alignments: (Bits) Value seq420 111 6e-19 >seq420 Length=427535 Score = 111 bits (122), Expect = 6e-19 Identities = 116/147 (79%), Gaps = 4/147 (3%) Strand=Plus/Minus Query 364425 CAATAGTCATACGAGAGGGAATGGAGAGAGGGTTGATGATGATGTCAGGCACCATGCCGT 364484 |||| ||||||||||||||||| | | | |||||||| |||| ||||||||| || || | Sbjct 11719 CAATCGTCATACGAGAGGGAATAGCGTGGGGGTTGATAATGAGGTCAGGCACAATACCCT 11660 Query 364485 CAGCG-GTAAAGGGCATATCTTC-GGGAGGAACGATGAGACCAATGGTTCCCTTTTGCGC 364542 | ||| || || ||||| ||||| || || | | ||| |||||||||||||||||| | Sbjct 11659 C-GCGAGTGAAAGGCATGTCTTCTTGGCGGTAAG-TGATACCAATGGTTCCCTTTTGACC 11602 Query 364543 ATAGCGAGAAGCAAACTTGTCGCCAAT 364569 | ||||| || ||||| || ||||| Sbjct 11601 GTGACGAGAGGCGAACTTATCACCAAT 11575 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1884871934085907