Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._2024MN13_20[genbank_20GCA_5F001662595.1_20201 6-06-24] 2,827 sequences; 30,179,533 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq442 271 6e-68 seq335 170 2e-37 >seq442 Length=20621 Score = 271 bits (300), Expect = 6e-68 Identities = 635/950 (67%), Gaps = 6/950 (1%) Strand=Plus/Minus Query 65993 ACAAACTTGGGAAGGGCAAGAGATGCGAGGTTGCAGACAGCTATCTCGTCAGGAGCGGTA 66052 ||| || | || |||||||| || || | ||| || || || | ||| || ||||| | Sbjct 17794 ACATACGTTGGCAGGGCAAGGGACGCCAAGTTACACACGGCCACCTCATCTGGAGCAGAG 17735 Query 66053 TACTCGACAATTTCGGTGCACAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTGATTA 66112 |||||||| || || |||||||| || || ||| ||||| || | |||| || || Sbjct 17734 TACTCGACGATCTCTGTGCACAGGTTGGAGCTGCGGATGGTACCGAGGTTCTTCTGGTTG 17675 Query 66113 CTCTTGCGATTGCATGCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTGGGAC 66172 |||||||| ||||| ||||||||||||| |||| | || | || |||||| || ||| Sbjct 17674 CTCTTGCGGTTGCAAGCATCCTTGTACAACATGAAAGGGTTTCCTGTCTCAGTCTGAGAC 17615 Query 66173 TCAATGATGGCGTGCCAAAGAGCGCGTGCCTTCACCGTACGTACCGCCCTACCTTTGCGT 66232 || | |||| || |||||| | ||||| | || | | | |||| | | | | Sbjct 17614 TCGAGAATGGAGTACCAAAGCTTCTGGGCCTTGATAGT-CTTGCGACCCTTACCCTCCTT 17556 Query 66233 -TCGTAATGTTCGTAGAGGTGTTCGAAGGATTCACCCCATACTTCGGACAGACATGGACA 66291 ||||| |||| ||| |||| || || | || || | || | || || Sbjct 17555 CTCGTAGCCCTCGTCGAGCGCCTCGAGCTCGTCGCCGTAAACATCTGCCAATCCAGGGCA 17496 Query 66292 CTTGTGTGGACACATCAGCGACCAATCACCATCCTGTTCTACACGACGCATAAATAGATC 66351 | || || ||||| || | ||| || || | || || ||||| ||| || ||||| Sbjct 17495 TTCGTTGGGGCACATGAGGGTCCAGTCGCCGTTCTTCTCGACACGCTTCATGAAGAGATC 17436 Query 66352 AGGTATCCAGAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAATGCCGTGATTTTT 66411 || |||||||| |||||||| | || || || || ||||| | ||||| || || Sbjct 17435 CGGAATCCAGAGAGCGTAGAACAAGTCACGGGCACGGACTTCCTCCTTACCGTGGTTCTT 17376 Query 66412 GCGCAAGTCGAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAACGA 66471 | |||||| ||||||||||||| || || |||||||| || | |||||||||||| | Sbjct 17375 TCTCAAGTCCAGGAACTCAAAGACATCCGCGTGCCATGGCTCAACGTAGATGGCGAAAGC 17316 Query 66472 GCCCATACGTTTGCCGCCACCTTGGTCGACGTAGCGAGCGACATTGTTGAAGACACGCAA 66531 || || ||| |||||||||||| ||||| | ||| |||||||| || || | Sbjct 17315 ACCAGGGCGCTTGTTGCCACCTTGGTCAACGTACCTTGCGGTGTTGTTGAACACGCGGAG 17256 Query 66532 CATCGGTACGAGCCCGTTAGATTTGCCATTGGTGCCGTCGATGGGGGATCCTCGTGCCCG 66591 ||| || || | ||||| || || || ||||| ||| | ||| | || || || Sbjct 17255 CATAGGGACAATGCCGTTCGAGTTTCCGTTGGTACCGGCAATGTATGCACCAGTGGCACG 17196 Query 66592 TATATCGTGAACATTCAGACCAATACCACCGGCCGTCTTCGAGATGGCAGCACAATCGGC 66651 ||| ||| | ||||| || ||||| || || ||||| ||||| |||||| Sbjct 17195 GATACGGTGGATATTCAATCCGATACCTCCAGCAGTCTTTGAGATCATGGCACAAGTCTT 17136 Query 66652 CACTGTCCGGAATATGCCGTCAATGGAGTCACCCTTGATGGTCAGGAGGTAGCATGAACT 66711 | ||| | || || ||||| || |||| ||| | | | |||| || Sbjct 17135 GAGTGTGTCATAGATACCCTCAATACTATCCTCCTTCATGTCGACCAAGAAGCAGGACGA 17076 Query 66712 AAGTTGGGGTTTGGGTGTGGCGGCCGAGAAGAGGGTGGGTGTAGCGTGCGTAAAGTAATG 66771 ||| |||| | ||||| | || |||||| || || | |||||| || ||||| | Sbjct 17075 AAGCTGGGCCTGTGGTGTACCAGCATTGAAGAGTGTTGGGGAAGCGTGTGTGAAGTATTT 17016 Query 66772 GCGAGACATGTAATTGTACGTCTCGA-TGACAGCATCAATGTTTTCGCCATGAATCCCGA 66830 | ||||||| ||||| ||||||| || | | ||||| | || || ||||| || | Sbjct 17015 GGAAGACATGAGGTTGTATGTCTCGATTGTCTTC-TCAATATCCTCACCGTGAATGCCCA 16957 Query 66831 GTGCACATCGCATCAGGAGGTATTGAGGCCGTTCGACCAGCCGATCCTTGATAT-GCATT 66889 ||| ||||| | | || || |||| || | || || || | | | | | Sbjct 16956 CCGCAACACGCATAATCATGTGCTGTGGCCTCTC-AGCAACCTTGCCATCAAGTCGGAGA 16898 Query 66890 AAGTAGGAGCGTTCCAGGGTCTTGATACCAAAGTACGAGTAATTGAAATC 66939 | |||||| || ||||||||||||| || ||||| ||| |||||||| Sbjct 16897 AGGTAGGATCGCTCCAGGGTCTTGAAGCCGAAGTATTGGTAGTTGAAATC 16848 Score = 111 bits (122), Expect = 1e-19 Identities = 331/497 (67%), Gaps = 19/497 (4%) Strand=Plus/Minus Query 65078 TCGACCGTGAACTGGATCGCATTAGCAGCCGCCTTGGTCCTAAGATAGTACATGCCGGTC 65137 ||||| ||||| ||||| | | || ||| |||| | || |||||||| |||||| Sbjct 18692 TCGACGGTGAATTGGATGGGGGCGGAGGCGGCCATGGTGCGGAGGTAGTACATTCCGGTC 18633 Query 65138 TTGAGGCC-AGCACGCCAAGCATAGAAATGCATCGATGATAATTTTGCATAAT-TCGGCT 65195 |||||||| ||| ||| || || ||||| |||| | || |||| | | | || | Sbjct 18632 TTGAGGCCGAGCTT-CCAGCCAGCAAAGTGCATGGATG-TGATCTTGCCCATTGTTGGGT 18575 Query 65196 CGGCCACATGCATATTCAACGACTGACTCTGATCGATGTAACGACCACGATCTGCAGC-C 65254 | || || || || | ||||| ||||||||| | ||| || || || || | Sbjct 18574 CCTTCATGTGGATGTTGAGGGACTGGGATTGATCGATGAAGGCACCGCGGTCGGCGGCTC 18515 Query 65255 ATGTCAATGATACGACGTCC--CGATATCTCCCAGACGGTCTTGTACAGGCGACGT-ACC 65311 | || | ||| | | || ||| |||||||||||||||||||| ||| | | | | Sbjct 18514 GTCTCGACGAT--GGTGCCCTGCGAGATCTCCCAGACGGTCTTGTAGAGG-GCCTTGATG 18458 Query 65312 TCAATTGGAATCTCCTCAATGTCCTGGACTGAACCACGACGTGCAATAATGCGATTACGC 65371 || || || | |||| ||||| || || | ||| || ||||| || Sbjct 18457 TCGGCGGGGATGTTGGGGATGTTCTGGATGGAGCCGCCGTCTGCGATGATGCGGTTCTCG 18398 Query 65372 ATCGACTCTGACCACAAACCCAAATCGATAAGATG-TTGA---ACCAAGTGACGATTGAT 65427 ||| || ||||| | ||||| |||| || | |||| |||| | | |||| Sbjct 18397 ATCTGGTCGGACCAGAGACCCATGTCGACCAGGTCCTTGAGCAACCAGGGG----TTGAC 18342 Query 65428 GACTTGGAACTCGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGGGTTCAAA 65487 ||||||||||||||| | ||| |||||||| |||||||| || ||| || || || Sbjct 18341 GACTTGGAACTCGCCAGCCAGGACACGACGCGAGTAGATGTTCGAGGTGTATGGCTCGAA 18282 Query 65488 GGATTCAGTGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGACCAACAA 65547 | | || || ||| || || |||| || || ||||| |||||||| ||||| | || Sbjct 18281 GCACTCGTTGAAGCCGAGGATCTGGGAGGTGGAGGCAGTGGGCATGGGTGCGACGAGCAG 18222 Query 65548 TGAGTTTCGCAATCCGT 65564 ||||| || | |||| Sbjct 18221 GGAGTTGCGGACACCGT 18205 >seq335 Length=25434 Score = 170 bits (188), Expect = 2e-37 Identities = 557/855 (65%), Gaps = 18/855 (2%) Strand=Plus/Plus Query 61087 ATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTG 61146 || |||| |||||||| ||||||||||| || |||||||| | |||||| | ||| | Sbjct 11776 ATCTGGCAGATGTACAAGAAGGCGGAAGCATCTTTCTGGACAGCAGAGGAGATTGATCTC 11835 Query 61147 TCCAAAGACATGAATGACTGGGA-----GCGTTTATCGAGCGGTGAACAACATTTCATTA 61201 ||||| ||| | | |||||| | || | || || | ||| | | ||||| Sbjct 11836 TCCAAGGACCTTCACGACTGGAACAATCGCCTCAAT-GAT-GATGAGCGCTACTTCATCT 11893 Query 61202 AACATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAAC 61261 ||||| | || ||||| ||||| || ||||| || ||||| ||||| | | || | Sbjct 11894 CCCATGTTCTCGCTTTCTTCGCCGCGTCTGACGGAATTGTCAACGAGAACCTCCTCGAGC 11953 Query 61262 GTTTCGCGCAG-GAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCC 61320 | ||| |||| ||||| || | | || || || || |||||||| ||||| || Sbjct 11954 GCTTCA-GCAGCGAGGTCCAGATCCCAGAAGCCCGCTGCTTCTACGGTTTCCAAATCATG 12012 Query 61321 ATGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCGG 61380 || ||||| | ||| | |||| ||| | |||||||| || ||||||| ||||| | Sbjct 12013 ATCGAGAACATTCACGCCGAGACATACTCCCTCCTCATCGACACATACATCAAGGAGCAG 12072 Query 61381 GCGGAACGTGAACGATTGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAAGCG 61440 || |||| | | ||||||||||||||||| || || | ||| ||| || Sbjct 12073 GCTCAACGGACATACCTCTTCAATGCCATCGAGACCATTCCTTGCATCAAGAAGAAGGCC 12132 Query 61441 GATTGGGCCTTCAATTGGATCACCAGTACAACG--GCTACATTTGGTGAACGATTGCTGG 61498 || ||||| | | ||||| ||| | || | |||| |||| | | || | | | Sbjct 12133 GACTGGGCAGTTAGGTGGAT--CCAAGATAAGGATTCTACCTTTGCTCAGCGTCTCGTTG 12190 Query 61499 CATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGA 61558 | || || | || |||||| | || ||| || || || ||| | || || ||| | | Sbjct 12191 CCTTCGCTGCTGTTGAGGGTATCTTCTTCTCCGGCTCCTTCGCCTCCATTTTCTGGCTCA 12250 Query 61559 AGAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAGG 61618 |||| ||||| || ||| | || ||||||||| || ||| | || || || || |||| Sbjct 12251 AGAAGCGTGGCCTCATGGCTGGCCTGACCTTCTCGAACGAGCTCATCTCCCGTGATGAGG 12310 Query 61619 GCATGCATTGTGATTTTGCTGTTTTGCTATTCAAACGCTATCTGGTGAATCGTCCGTCGG 61678 | | || || || || | || ||| | | || | || || Sbjct 12311 GTCTCCACACCGACTTCGCCTGCCTCCTCTTC---TCCCACCTTAGACACCGCCCAAGCA 12367 Query 61679 AGGAGCGTGTGGGTGAGATTGTTCGTGAGGCGGTAACTATCGAACAGGAATTTCTGACTG 61738 || || || || | || ||||| || | ||||| || || || |||||| Sbjct 12368 AGCAGGCCGTCCAAGACGTCATTACCGAGGCTGTCAGCATCGAGCAAGAGTTCTTGACTG 12427 Query 61739 ACGCTTTGCCCGTCTCACTCATCGGCATGAATTGTGGAC-TAATGTCGCAGTATATTGAA 61797 | || | ||| | || |||||||||| | || | ||| ||| || ||||| Sbjct 12428 AGGCACTTCCCTGTGCGCTGCTCGGCATGAA-CGCCAACTTGATGAAGCAATACATTGAG 12486 Query 61798 TTTGTTGCCGACCGTCTGTTGGTCGATTTGGGTATGAAGCGGATCTATAATACGAAAAAC 61857 || || |||||| | ||| || || | |||| || | ||| || ||| ||| Sbjct 12487 TTCGTCGCCGACAGGCTGCTGCTCTCCCTCGGTAACGAGAAGTACTACAAGTCGACCAAC 12546 Query 61858 CCATTTGATTTCATGGACATGATTTCGCTGGATGGCAAGACGAATTTTTTCGAGAAACGT 61917 ||||| ||||||||||| | || || |||| || ||||| || || |||||||| || Sbjct 12547 CCATTCGATTTCATGGAGAACATCTCCCTGGCAGGAAAGACCAACTTCTTCGAGAAGCGC 12606 Query 61918 GTAGGCGACTATCAA 61932 || | |||||| ||| Sbjct 12607 GTCGCCGACTACCAA 12621 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397554302167280