Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20sp._20BL308_20[genbank_20GCA_5F001630595.1_202016
-05-27] 3,126 sequences; 31,419,026 total letters
Query= AAMG01000185.1
Length=266
Score E
Sequences producing significant alignments: (Bits) Value
seq566 255 9e-66
seq900 176 7e-42
seq888 158 2e-36
seq424 147 3e-33
seq1545 84.2 3e-14
seq1238 78.8 1e-12
>seq566
Length=211
Score = 255 bits (282), Expect = 9e-66
Identities = 180/202 (89%), Gaps = 3/202 (1%)
Strand=Plus/Minus
Query 28 CGAGCTTGATGACTCGCGCTTACTAGGAATTTCCTCGTTGAAGACCAACAATTGCAATGA 87
|||||| |||||||||||| ||||||||||| |||||||||||| ||| ||||||||||
Sbjct 207 CGAGCT-GATGACTCGCGCCTACTAGGAATT-CCTCGTTGAAGAGCAATAATTGCAATGC 150
Query 88 TCTATCCCCATCACGATGAAATTTCA-AAGATTACCCGGACCTGTCGGCCAAGGTGATAG 146
|||||||||| ||||| | ||| | |||||||||| | ||||||||||||||||||
Sbjct 149 TCTATCCCCAGCACGACAGAGTTTAACAAGATTACCCAGGCCTGTCGGCCAAGGTGATGA 90
Query 147 ACTCGTTGAATACATCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 206
|||||||| | ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 89 ACTCGTTGGCTCTGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 30
Query 207 CCTGTTATTGCCTCAAACTTCC 228
||||||||||||||||||||||
Sbjct 29 CCTGTTATTGCCTCAAACTTCC 8
>seq900
Length=211
Score = 176 bits (194), Expect = 7e-42
Identities = 144/171 (84%), Gaps = 3/171 (2%)
Strand=Plus/Plus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
||||||||||||||||||||||| | |||||| |||||||||||| ||||||||||| |
Sbjct 43 GTACAAAGGGCAGGGACGTAGTCGGCACGAGCT-GATGACTCGCGCCTACTAGGAATT-C 100
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATT 119
||||| ||||| ||| |||||||||| |||||||||| ||||| | ||| | ||||||
Sbjct 101 CTCGTGGAAGAGCAATAATTGCAATGCTCTATCCCCAGCACGACAGAGTTTAACAAGATT 160
Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGC 170
|||| | ||| |||||||||||||| |||||||| | ||||||||||
Sbjct 161 ACCCAGGCCTTTCGGCCAAGGTGATGAACTCGTTGGCTCTGTCAGTGTAGC 211
>seq888
Length=211
Score = 158 bits (174), Expect = 2e-36
Identities = 104/115 (90%), Gaps = 0/115 (0%)
Strand=Plus/Minus
Query 114 AAGATTACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCG 173
|||||||||| | ||| |||||||||||||| |||||||| | |||||||||||||
Sbjct 198 AAGATTACCCAGGCCTTTCGGCCAAGGTGATGAACTCGTTGGCTCTGTCAGTGTAGCGCG 139
Query 174 CGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 228
|||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 138 CGTGCGGCCCAGAACATCTAAGGGCATCACAGCCCTGTTATTGCCTCAAACTTCC 84
>seq424
Length=211
Score = 147 bits (162), Expect = 3e-33
Identities = 98/109 (90%), Gaps = 0/109 (0%)
Strand=Plus/Plus
Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179
|||| | ||| |||||||||||||| |||||||| | |||||||||||||||||||
Sbjct 1 ACCCAGGCCTTTCGGCCAAGGTGATGAACTCGTTGGCTCTGTCAGTGTAGCGCGCGTGCG 60
Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 228
||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 61 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACGTCC 109
>seq1545
Length=530
Score = 84.2 bits (92), Expect = 3e-14
Identities = 59/65 (91%), Gaps = 2/65 (3%)
Strand=Plus/Plus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
||||||||||||||||||||||| | ||||| ||||||||||||| ||||||||| |||
Sbjct 468 GTACAAAGGGCAGGGACGTAGTCGGCACGAGC-TGATGACTCGCGCCTACTAGGAA-TTC 525
Query 61 CTCGT 65
|||||
Sbjct 526 CTCGT 530
>seq1238
Length=334
Score = 78.8 bits (86), Expect = 1e-12
Identities = 53/58 (91%), Gaps = 1/58 (2%)
Strand=Plus/Plus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATT 58
||||||||||||||||| || ||||||||||||| ||||| |||||||||| ||||||
Sbjct 161 GTACAAAGGGCAGGGACTTAATCAACGCGAGCTT-ATGACCCGCGCTTACTGGGAATT 217
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 751977227090
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |