Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._20BL308_20[genbank_20GCA_5F001630595.1_202016 -05-27] 3,126 sequences; 31,419,026 total letters Query= AAMG01000190.1 Length=117 Score E Sequences producing significant alignments: (Bits) Value seq865 194 9e-48 seq50 181 6e-44 seq749 165 5e-39 seq702 163 2e-38 seq29 163 2e-38 seq1419 104 1e-20 >seq865 Length=211 Score = 194 bits (214), Expect = 9e-48 Identities = 113/117 (97%), Gaps = 0/117 (0%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 ||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct 191 GAACCCAAAAACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAAAGATAACATCGCCC 132 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 |||||||||||||||||||||| || ||||||||||||||||||||||||||||||| Sbjct 131 GATCCCTAGTCGGCATAGTTTATGGGTAAGACTACGACGGTATCTGATCGTCTTCGA 75 >seq50 Length=206 Score = 181 bits (200), Expect = 6e-44 Identities = 108/112 (96%), Gaps = 1/112 (1%) Strand=Plus/Minus Query 1 GAACCCAAAGA-CTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCC 59 ||||||||| | ||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 112 GAACCCAAAAAACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAAAGATAACATCGCC 53 Query 60 CGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGT 111 ||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct 52 CGATCCCTAGTCGGCATAGTTTATGGTTAAGACTACGACGGTATCTGATCGT 1 >seq749 Length=211 Score = 165 bits (182), Expect = 5e-39 Identities = 96/99 (97%), Gaps = 0/99 (0%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 ||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct 113 GAACCCAAAAACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAAAGATAACATCGCCC 172 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACG 99 |||||||||||||||||||||| |||||||||||||||| Sbjct 173 GATCCCTAGTCGGCATAGTTTATGGTTAAGACTACGACG 211 >seq702 Length=211 Score = 163 bits (180), Expect = 2e-38 Identities = 95/98 (97%), Gaps = 0/98 (0%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 ||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct 114 GAACCCAAAAACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAAAGATAACATCGCCC 173 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGAC 98 |||||||||||||||||||||| ||||||||||||||| Sbjct 174 GATCCCTAGTCGGCATAGTTTATGGTTAAGACTACGAC 211 >seq29 Length=205 Score = 163 bits (180), Expect = 2e-38 Identities = 95/98 (97%), Gaps = 0/98 (0%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 ||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct 108 GAACCCAAAAACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAAAGATAACATCGCCC 167 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGAC 98 |||||||||||||||||||||| ||||||||||||||| Sbjct 168 GATCCCTAGTCGGCATAGTTTATGGTTAAGACTACGAC 205 >seq1419 Length=417 Score = 104 bits (114), Expect = 1e-20 Identities = 93/117 (79%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 |||||||||||||||| |||| || | | |||| ||| |||| ||||| |||| Sbjct 272 GAACCCAAAGACTTTGGTTTCCCGGACGCTGCCCGGCGGGTCATGGGAATAACGCCGCCG 331 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 |||| ||||| ||||| ||||| ||| ||||||||||||||||||||||||||| Sbjct 332 GATCGCTAGTTGGCATCGTTTATGGTCGGAACTACGACGGTATCTGATCGTCTTCGA 388 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 278391841140