Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20sp._20BL308_20[genbank_20GCA_5F001630595.1_202016
-05-27] 3,126 sequences; 31,419,026 total letters
Query= AAMG01000190.1
Length=117
Score E
Sequences producing significant alignments: (Bits) Value
seq865 194 9e-48
seq50 181 6e-44
seq749 165 5e-39
seq702 163 2e-38
seq29 163 2e-38
seq1419 104 1e-20
>seq865
Length=211
Score = 194 bits (214), Expect = 9e-48
Identities = 113/117 (97%), Gaps = 0/117 (0%)
Strand=Plus/Minus
Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60
||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 191 GAACCCAAAAACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAAAGATAACATCGCCC 132
Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117
|||||||||||||||||||||| || |||||||||||||||||||||||||||||||
Sbjct 131 GATCCCTAGTCGGCATAGTTTATGGGTAAGACTACGACGGTATCTGATCGTCTTCGA 75
>seq50
Length=206
Score = 181 bits (200), Expect = 6e-44
Identities = 108/112 (96%), Gaps = 1/112 (1%)
Strand=Plus/Minus
Query 1 GAACCCAAAGA-CTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCC 59
||||||||| | ||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 112 GAACCCAAAAAACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAAAGATAACATCGCC 53
Query 60 CGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGT 111
||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 52 CGATCCCTAGTCGGCATAGTTTATGGTTAAGACTACGACGGTATCTGATCGT 1
>seq749
Length=211
Score = 165 bits (182), Expect = 5e-39
Identities = 96/99 (97%), Gaps = 0/99 (0%)
Strand=Plus/Plus
Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60
||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 113 GAACCCAAAAACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAAAGATAACATCGCCC 172
Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACG 99
|||||||||||||||||||||| ||||||||||||||||
Sbjct 173 GATCCCTAGTCGGCATAGTTTATGGTTAAGACTACGACG 211
>seq702
Length=211
Score = 163 bits (180), Expect = 2e-38
Identities = 95/98 (97%), Gaps = 0/98 (0%)
Strand=Plus/Plus
Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60
||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 114 GAACCCAAAAACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAAAGATAACATCGCCC 173
Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGAC 98
|||||||||||||||||||||| |||||||||||||||
Sbjct 174 GATCCCTAGTCGGCATAGTTTATGGTTAAGACTACGAC 211
>seq29
Length=205
Score = 163 bits (180), Expect = 2e-38
Identities = 95/98 (97%), Gaps = 0/98 (0%)
Strand=Plus/Plus
Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60
||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 108 GAACCCAAAAACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAAAGATAACATCGCCC 167
Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGAC 98
|||||||||||||||||||||| |||||||||||||||
Sbjct 168 GATCCCTAGTCGGCATAGTTTATGGTTAAGACTACGAC 205
>seq1419
Length=417
Score = 104 bits (114), Expect = 1e-20
Identities = 93/117 (79%), Gaps = 0/117 (0%)
Strand=Plus/Plus
Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60
|||||||||||||||| |||| || | | |||| ||| |||| ||||| ||||
Sbjct 272 GAACCCAAAGACTTTGGTTTCCCGGACGCTGCCCGGCGGGTCATGGGAATAACGCCGCCG 331
Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117
|||| ||||| ||||| ||||| ||| |||||||||||||||||||||||||||
Sbjct 332 GATCGCTAGTTGGCATCGTTTATGGTCGGAACTACGACGGTATCTGATCGTCTTCGA 388
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 278391841140
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |