Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._20BL308_20[genbank_20GCA_5F001630595.1_202016 -05-27] 3,126 sequences; 31,419,026 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq424 250 4e-64 seq888 224 2e-56 seq372 190 3e-46 seq1419 167 4e-39 seq566 147 3e-33 seq368 125 1e-26 >seq424 Length=211 Score = 250 bits (276), Expect = 4e-64 Identities = 167/185 (90%), Gaps = 1/185 (1%) Strand=Plus/Plus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61 ||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 28 ACTCGTTGGCTCTGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 87 Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCC 121 |||||||||||||||||| ||||| |||| | |||| |||||||||||||||||||||| Sbjct 88 CCTGTTATTGCCTCAAACGTCCATCGGCTTG-AGCCGATAGTCCCTCTAAGAAGCCAGCG 146 Query 122 ACCAACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAA 181 |||| ||| || |||||||||||||||||||||||||||||||||||| |||||| Sbjct 147 ACCAGCCAAAGCTAGCCGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGCAATTAA 206 Query 182 CCAGA 186 |||| Sbjct 207 GCAGA 211 >seq888 Length=211 Score = 224 bits (248), Expect = 2e-56 Identities = 150/166 (90%), Gaps = 1/166 (1%) Strand=Plus/Minus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61 ||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 165 ACTCGTTGGCTCTGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGC 106 Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCC 121 |||||||||||||||||||||||| |||| | |||| |||||||||||||||||||||| Sbjct 105 CCTGTTATTGCCTCAAACTTCCATCGGCTTG-AGCCGATAGTCCCTCTAAGAAGCCAGCG 47 Query 122 ACCAACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTC 167 |||| ||| || ||||||||||||||||||||||||||||| Sbjct 46 ACCAGCCAAAGCTAGCCGGGCTATTTAGCAGGTTAAGGTCTCGTTC 1 >seq372 Length=211 Score = 190 bits (210), Expect = 3e-46 Identities = 114/120 (95%), Gaps = 0/120 (0%) Strand=Plus/Plus Query 139 GGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCA 198 |||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||| Sbjct 10 GGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGCAATTAAGCAGACAAATCACTCCA 69 Query 199 CCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 ||||||||||||||||||||||||||||||| | || |||||||||||| |||||||||| Sbjct 70 CCAACTAAGAACGGCCATGCACCACCACCCACAAAAGCAAGAAAGAGCTCTCAATCTGTC 129 >seq1419 Length=417 Score = 167 bits (184), Expect = 4e-39 Identities = 97/100 (97%), Gaps = 0/100 (0%) Strand=Plus/Plus Query 159 GTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGC 218 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct 45 GTCTCGTTCGTTATCGGAATTAACCAGACAAATCGCTCCACCAACTAAGAACGGCCATGC 104 Query 219 ACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 ||||||||||| |||||| ||||||||||||||||||||| Sbjct 105 ACCACCACCCACAGAATCGAGAAAGAGCTATCAATCTGTC 144 >seq566 Length=211 Score = 147 bits (162), Expect = 3e-33 Identities = 86/89 (97%), Gaps = 0/89 (0%) Strand=Plus/Minus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61 ||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 89 ACTCGTTGGCTCTGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 30 Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCT 90 |||||||||||||||||||||||| |||| Sbjct 29 CCTGTTATTGCCTCAAACTTCCATCGGCT 1 >seq368 Length=211 Score = 125 bits (138), Expect = 1e-26 Identities = 75/79 (95%), Gaps = 0/79 (0%) Strand=Plus/Plus Query 180 AACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAG 239 || ||||||||||||||||||||||||||||||||||||||||||||||| | ||||||| Sbjct 1 AAGCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCACAAAATCAAG 60 Query 240 AAAGAGCTATCAATCTGTC 258 |||||||| |||||||||| Sbjct 61 AAAGAGCTCTCAATCTGTC 79 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796775870406