Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20sp._20BL308_20[genbank_20GCA_5F001630595.1_202016
-05-27] 3,126 sequences; 31,419,026 total letters
Query= AAMG01000911.1
Length=280
Score E
Sequences producing significant alignments: (Bits) Value
seq424 250 4e-64
seq888 224 2e-56
seq372 190 3e-46
seq1419 167 4e-39
seq566 147 3e-33
seq368 125 1e-26
>seq424
Length=211
Score = 250 bits (276), Expect = 4e-64
Identities = 167/185 (90%), Gaps = 1/185 (1%)
Strand=Plus/Plus
Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61
||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 28 ACTCGTTGGCTCTGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 87
Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCC 121
|||||||||||||||||| ||||| |||| | |||| ||||||||||||||||||||||
Sbjct 88 CCTGTTATTGCCTCAAACGTCCATCGGCTTG-AGCCGATAGTCCCTCTAAGAAGCCAGCG 146
Query 122 ACCAACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAA 181
|||| ||| || |||||||||||||||||||||||||||||||||||| ||||||
Sbjct 147 ACCAGCCAAAGCTAGCCGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGCAATTAA 206
Query 182 CCAGA 186
||||
Sbjct 207 GCAGA 211
>seq888
Length=211
Score = 224 bits (248), Expect = 2e-56
Identities = 150/166 (90%), Gaps = 1/166 (1%)
Strand=Plus/Minus
Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61
||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 165 ACTCGTTGGCTCTGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGC 106
Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCC 121
|||||||||||||||||||||||| |||| | |||| ||||||||||||||||||||||
Sbjct 105 CCTGTTATTGCCTCAAACTTCCATCGGCTTG-AGCCGATAGTCCCTCTAAGAAGCCAGCG 47
Query 122 ACCAACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTC 167
|||| ||| || |||||||||||||||||||||||||||||
Sbjct 46 ACCAGCCAAAGCTAGCCGGGCTATTTAGCAGGTTAAGGTCTCGTTC 1
>seq372
Length=211
Score = 190 bits (210), Expect = 3e-46
Identities = 114/120 (95%), Gaps = 0/120 (0%)
Strand=Plus/Plus
Query 139 GGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCA 198
|||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||
Sbjct 10 GGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGCAATTAAGCAGACAAATCACTCCA 69
Query 199 CCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258
||||||||||||||||||||||||||||||| | || |||||||||||| ||||||||||
Sbjct 70 CCAACTAAGAACGGCCATGCACCACCACCCACAAAAGCAAGAAAGAGCTCTCAATCTGTC 129
>seq1419
Length=417
Score = 167 bits (184), Expect = 4e-39
Identities = 97/100 (97%), Gaps = 0/100 (0%)
Strand=Plus/Plus
Query 159 GTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGC 218
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 45 GTCTCGTTCGTTATCGGAATTAACCAGACAAATCGCTCCACCAACTAAGAACGGCCATGC 104
Query 219 ACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258
||||||||||| |||||| |||||||||||||||||||||
Sbjct 105 ACCACCACCCACAGAATCGAGAAAGAGCTATCAATCTGTC 144
>seq566
Length=211
Score = 147 bits (162), Expect = 3e-33
Identities = 86/89 (97%), Gaps = 0/89 (0%)
Strand=Plus/Minus
Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61
||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 89 ACTCGTTGGCTCTGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 30
Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCT 90
|||||||||||||||||||||||| ||||
Sbjct 29 CCTGTTATTGCCTCAAACTTCCATCGGCT 1
>seq368
Length=211
Score = 125 bits (138), Expect = 1e-26
Identities = 75/79 (95%), Gaps = 0/79 (0%)
Strand=Plus/Plus
Query 180 AACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAG 239
|| ||||||||||||||||||||||||||||||||||||||||||||||| | |||||||
Sbjct 1 AAGCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCACAAAATCAAG 60
Query 240 AAAGAGCTATCAATCTGTC 258
|||||||| ||||||||||
Sbjct 61 AAAGAGCTCTCAATCTGTC 79
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 796775870406
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |