Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20sp._20BL308_20[genbank_20GCA_5F001630595.1_202016
-05-27] 3,126 sequences; 31,419,026 total letters
Query= AAMG01000941.1
Length=299
Score E
Sequences producing significant alignments: (Bits) Value
seq764 374 1e-101
seq599 369 6e-100
seq541 363 3e-98
seq878 304 2e-80
seq1127 185 1e-44
seq283 168 1e-39
>seq764
Length=211
Score = 374 bits (414), Expect = 1e-101
Identities = 209/210 (99%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 62 GACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGAA 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2 GACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGAA 61
Query 122 TTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATG 181
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 62 TTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAACAGCAACGTCGCTATG 121
Query 182 AACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTC 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 122 AACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTC 181
Query 242 AAATTTCGAGGGACTAAAGGATCGATAGGC 271
||||||||||||||||||||||||||||||
Sbjct 182 AAATTTCGAGGGACTAAAGGATCGATAGGC 211
>seq599
Length=211
Score = 369 bits (408), Expect = 6e-100
Identities = 207/209 (99%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 25 CGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGT 84
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 209 CGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACGT 150
Query 85 TCCCTATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAG 144
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 149 TCCCTATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCGTCGGTATGATAGGAAG 90
Query 145 AGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAG 204
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 89 AGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAG 30
Query 205 TTATCCCTGTGGTAACTTTTCTGGCACCT 233
|||||||||||||||||||||||||||||
Sbjct 29 TTATCCCTGTGGTAACTTTTCTGGCACCT 1
>seq541
Length=211
Score = 363 bits (402), Expect = 3e-98
Identities = 207/211 (98%), Gaps = 0/211 (0%)
Strand=Plus/Minus
Query 16 CCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCC 75
|||||| | |||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 211 CCATTGCGACGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCC 152
Query 76 AGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTAT 135
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 151 AGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGACTTCTGCTTCGGTAT 92
Query 136 GATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCC 195
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 91 GATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCC 32
Query 196 ACAAGCCAGTTATCCCTGTGGTAACTTTTCT 226
|||||||||||||||||||||||||||||||
Sbjct 31 ACAAGCCAGTTATCCCTGTGGTAACTTTTCT 1
>seq878
Length=211
Score = 304 bits (336), Expect = 2e-80
Identities = 170/171 (99%), Gaps = 0/171 (0%)
Strand=Plus/Plus
Query 125 TGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAAC 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 TGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAAC 60
Query 185 GCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAA 244
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 61 GCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCCCCTCTAGCCTCAAA 120
Query 245 TTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 295
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 121 TTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 171
>seq1127
Length=293
Score = 185 bits (204), Expect = 1e-44
Identities = 107/110 (97%), Gaps = 0/110 (0%)
Strand=Plus/Plus
Query 11 AATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTA 70
||||||||||| | |||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 184 AATTACCATTGCGACGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTA 243
Query 71 AACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 120
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 244 AACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 293
>seq283
Length=211
Score = 168 bits (186), Expect = 1e-39
Identities = 93/93 (100%), Gaps = 0/93 (0%)
Strand=Plus/Minus
Query 203 AGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGA 262
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 211 AGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGA 152
Query 263 TCGATAGGCCACACTTTCATGGTTTGTATTCAC 295
|||||||||||||||||||||||||||||||||
Sbjct 151 TCGATAGGCCACACTTTCATGGTTTGTATTCAC 119
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 854373291456
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |