Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._20BL308_20[genbank_20GCA_5F001630595.1_202016 -05-27] 3,126 sequences; 31,419,026 total letters Query= AAMG01001382.1 Length=124 Score E Sequences producing significant alignments: (Bits) Value seq1238 86.0 4e-15 seq1545 84.2 1e-14 seq900 78.8 6e-13 >seq1238 Length=334 Score = 86.0 bits (94), Expect = 4e-15 Identities = 67/76 (88%), Gaps = 3/76 (4%) Strand=Plus/Plus Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108 |||||||| |||| || ||||||||| ||||||||||| ||||||||||||||||||| Sbjct 121 CTCACTAAACCATC-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACT 178 Query 109 TAATACAACGCAAGCT 124 |||| |||||| |||| Sbjct 179 TAAT-CAACGCGAGCT 193 >seq1545 Length=530 Score = 84.2 bits (92), Expect = 1e-14 Identities = 64/72 (89%), Gaps = 3/72 (4%) Strand=Plus/Plus Query 39 TCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAG 98 |||||||| |||||| |||| || || ||||||||| ||||||||||| |||||||||| Sbjct 419 TCCGAAAGC-CTCACTTAGCCGTT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAG 475 Query 99 GGCAGGGACGTA 110 |||||||||||| Sbjct 476 GGCAGGGACGTA 487 >seq900 Length=211 Score = 78.8 bits (86), Expect = 6e-13 Identities = 56/62 (90%), Gaps = 2/62 (3%) Strand=Plus/Plus Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108 |||||| |||| || || ||||||||| ||||||||||| |||||||||||||||||||| Sbjct 3 CTCACTTAGCCGTT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACG 60 Query 109 TA 110 || Sbjct 61 TA 62 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 300791184680