Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._20BL308_20[genbank_20GCA_5F001630595.1_202016 -05-27] 3,126 sequences; 31,419,026 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq566 342 1e-91 seq888 340 3e-91 seq424 306 7e-81 seq900 253 4e-65 seq1545 77.0 6e-12 seq1238 77.0 6e-12 >seq566 Length=211 Score = 342 bits (378), Expect = 1e-91 Identities = 200/207 (97%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 96 AGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCA 155 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1 AGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCA 60 Query 156 CGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCCGGAAGGTCTGGGTAATC 215 |||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||| Sbjct 61 CGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCCGACAGGCCTGGGTAATC 120 Query 216 TTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAAT 275 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 121 TTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAAT 180 Query 276 GCCTAGTAAGCGCGTGTCATCAGCACG 302 ||||||| ||||| ||||||||| || Sbjct 181 TCCTAGTAGGCGCGAGTCATCAGCTCG 207 >seq888 Length=211 Score = 340 bits (376), Expect = 3e-91 Identities = 202/211 (96%), Gaps = 0/211 (0%) Strand=Plus/Plus Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAG 79 || ||||||||||||||||||||||||| ||| |||||||| |||||| |||||||||| Sbjct 1 GAACGAGACCTTAACCTGCTAAATAGCCCGGCTAGCTTTGGCTGGTCGCTGGCTTCTTAG 60 Query 80 AGGGACTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTA 139 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct 61 AGGGACTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGGCTGTGATGCCCTTA 120 Query 140 GATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCCG 199 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 121 GATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCCG 180 Query 200 GAAGGTCTGGGTAATCTTGTTAAACTCTGTC 230 |||| ||||||||||||||||||||||||| Sbjct 181 AAAGGCCTGGGTAATCTTGTTAAACTCTGTC 211 >seq424 Length=211 Score = 306 bits (338), Expect = 7e-81 Identities = 183/192 (95%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAG 79 || ||||||||||||||||||||||||| ||| |||||||| |||||| |||||||||| Sbjct 192 GAACGAGACCTTAACCTGCTAAATAGCCCGGCTAGCTTTGGCTGGTCGCTGGCTTCTTAG 133 Query 80 AGGGACTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTA 139 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 132 AGGGACTATCGGCTCAAGCCGATGGACGTTTGAGGCAATAACAGGTCTGTGATGCCCTTA 73 Query 140 GATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCCG 199 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 72 GATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCCG 13 Query 200 GAAGGTCTGGGT 211 |||| |||||| Sbjct 12 AAAGGCCTGGGT 1 >seq900 Length=211 Score = 253 bits (280), Expect = 4e-65 Identities = 157/168 (93%), Gaps = 0/168 (0%) Strand=Plus/Minus Query 161 GCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTT 220 ||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||| Sbjct 211 GCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCCGAAAGGCCTGGGTAATCTTGTT 152 Query 221 AAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTA 280 ||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||| Sbjct 151 AAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCCACGAGGAATTCCTA 92 Query 281 GTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328 ||| ||||| ||||||||| || | || ||||||||||||||||||| Sbjct 91 GTAGGCGCGAGTCATCAGCTCGTGCCGACTACGTCCCTGCCCTTTGTA 44 >seq1545 Length=530 Score = 77.0 bits (84), Expect = 6e-12 Identities = 54/62 (87%), Gaps = 0/62 (0%) Strand=Plus/Minus Query 267 ACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTTTG 326 ||||||||| ||||||| ||||| ||||||||| || | || ||||||||||||||||| Sbjct 530 ACGAGGAATTCCTAGTAGGCGCGAGTCATCAGCTCGTGCCGACTACGTCCCTGCCCTTTG 471 Query 327 TA 328 || Sbjct 470 TA 469 >seq1238 Length=334 Score = 77.0 bits (84), Expect = 6e-12 Identities = 51/57 (89%), Gaps = 0/57 (0%) Strand=Plus/Minus Query 272 GAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328 |||| || |||||||||| ||||| ||| ||||||||||| |||||||||||||||| Sbjct 218 GAATTCCCAGTAAGCGCGGGTCATAAGCTCGCGTTGATTAAGTCCCTGCCCTTTGTA 162 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 947170390528