Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20sp._20BL308_20[genbank_20GCA_5F001630595.1_202016
-05-27] 3,126 sequences; 31,419,026 total letters
Query= AAMG01002186.1
Length=328
Score E
Sequences producing significant alignments: (Bits) Value
seq566 342 1e-91
seq888 340 3e-91
seq424 306 7e-81
seq900 253 4e-65
seq1545 77.0 6e-12
seq1238 77.0 6e-12
>seq566
Length=211
Score = 342 bits (378), Expect = 1e-91
Identities = 200/207 (97%), Gaps = 0/207 (0%)
Strand=Plus/Plus
Query 96 AGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCA 155
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 AGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCA 60
Query 156 CGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCCGGAAGGTCTGGGTAATC 215
|||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||
Sbjct 61 CGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCCGACAGGCCTGGGTAATC 120
Query 216 TTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAAT 275
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 121 TTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAAT 180
Query 276 GCCTAGTAAGCGCGTGTCATCAGCACG 302
||||||| ||||| ||||||||| ||
Sbjct 181 TCCTAGTAGGCGCGAGTCATCAGCTCG 207
>seq888
Length=211
Score = 340 bits (376), Expect = 3e-91
Identities = 202/211 (96%), Gaps = 0/211 (0%)
Strand=Plus/Plus
Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAG 79
|| ||||||||||||||||||||||||| ||| |||||||| |||||| ||||||||||
Sbjct 1 GAACGAGACCTTAACCTGCTAAATAGCCCGGCTAGCTTTGGCTGGTCGCTGGCTTCTTAG 60
Query 80 AGGGACTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTA 139
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 61 AGGGACTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGGCTGTGATGCCCTTA 120
Query 140 GATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCCG 199
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 121 GATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCCG 180
Query 200 GAAGGTCTGGGTAATCTTGTTAAACTCTGTC 230
|||| |||||||||||||||||||||||||
Sbjct 181 AAAGGCCTGGGTAATCTTGTTAAACTCTGTC 211
>seq424
Length=211
Score = 306 bits (338), Expect = 7e-81
Identities = 183/192 (95%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAG 79
|| ||||||||||||||||||||||||| ||| |||||||| |||||| ||||||||||
Sbjct 192 GAACGAGACCTTAACCTGCTAAATAGCCCGGCTAGCTTTGGCTGGTCGCTGGCTTCTTAG 133
Query 80 AGGGACTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTA 139
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 132 AGGGACTATCGGCTCAAGCCGATGGACGTTTGAGGCAATAACAGGTCTGTGATGCCCTTA 73
Query 140 GATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCCG 199
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 72 GATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCCG 13
Query 200 GAAGGTCTGGGT 211
|||| ||||||
Sbjct 12 AAAGGCCTGGGT 1
>seq900
Length=211
Score = 253 bits (280), Expect = 4e-65
Identities = 157/168 (93%), Gaps = 0/168 (0%)
Strand=Plus/Minus
Query 161 GCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTT 220
||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||
Sbjct 211 GCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCCGAAAGGCCTGGGTAATCTTGTT 152
Query 221 AAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTA 280
||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||
Sbjct 151 AAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCCACGAGGAATTCCTA 92
Query 281 GTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328
||| ||||| ||||||||| || | || |||||||||||||||||||
Sbjct 91 GTAGGCGCGAGTCATCAGCTCGTGCCGACTACGTCCCTGCCCTTTGTA 44
>seq1545
Length=530
Score = 77.0 bits (84), Expect = 6e-12
Identities = 54/62 (87%), Gaps = 0/62 (0%)
Strand=Plus/Minus
Query 267 ACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTTTG 326
||||||||| ||||||| ||||| ||||||||| || | || |||||||||||||||||
Sbjct 530 ACGAGGAATTCCTAGTAGGCGCGAGTCATCAGCTCGTGCCGACTACGTCCCTGCCCTTTG 471
Query 327 TA 328
||
Sbjct 470 TA 469
>seq1238
Length=334
Score = 77.0 bits (84), Expect = 6e-12
Identities = 51/57 (89%), Gaps = 0/57 (0%)
Strand=Plus/Minus
Query 272 GAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328
|||| || |||||||||| ||||| ||| ||||||||||| ||||||||||||||||
Sbjct 218 GAATTCCCAGTAAGCGCGGGTCATAAGCTCGCGTTGATTAAGTCCCTGCCCTTTGTA 162
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 947170390528
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |