Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20sp._20BL308_20[genbank_20GCA_5F001630595.1_202016
-05-27] 3,126 sequences; 31,419,026 total letters
Query= AAMG01002236.1
Length=287
Score E
Sequences producing significant alignments: (Bits) Value
seq1127 244 2e-62
seq280 228 1e-57
seq281 224 2e-56
seq552 104 4e-20
seq655 100 5e-19
seq302 77.0 5e-12
seq104 77.0 5e-12
>seq1127
Length=293
Score = 244 bits (270), Expect = 2e-62
Identities = 162/176 (92%), Gaps = 3/176 (2%)
Strand=Plus/Minus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
|||||||||||||||| | |||||| ||||||||||||||||||||||||| |||||||
Sbjct 176 GTACGAGAGGAACCGCTCA-TTCAGA-TAATTGGTTTTTGCGGCTGTCTGACAAGGCAGT 119
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 118 GCCGCGAAGCTACCATCTGCTGGATAATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 59
Query 121 GAACGGGGTGATTCTCTCCTGCACATCGTAGTCGGATACGAATAGG-CTTCGGCCC 175
||| | | ||||| ||||| ||||||||||||||||||||||||| ||| |||||
Sbjct 58 GAAAGCGATGATTTTCTCCCACACATCGTAGTCGGATACGAATAGGCCTTTGGCCC 3
>seq280
Length=211
Score = 228 bits (252), Expect = 1e-57
Identities = 178/207 (86%), Gaps = 4/207 (2%)
Strand=Plus/Minus
Query 74 CATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCAGAACGGGGTGATT 133
|||||||||||| ||||||||||||||||||||||||||||||||||||| | | |||||
Sbjct 211 CATCTGCTGGATAATGGCTGAACGCCTCTAAGTCAGAATCCATGCCAGAAAGCGATGATT 152
Query 134 CTCTCCTGCACATCGTAGTCGGATACGAATAGG-CTTCGGCCCCGAACCTTAGCAGGCCG 192
||||| ||||||||||||||||||||||||| ||| ||||| ||| | |||| || ||
Sbjct 151 TTCTCCCACACATCGTAGTCGGATACGAATAGGCCTTTGGCCCTGAATCCTAGCTGGTCG 92
Query 193 GCAACGGGCGTCCC-GCGGAAGCGCGGGGCGCTCAGCTGGCGGATTGCAATTTCACCATG 251
| |||||| ||||| | ||||| |||||| || ||||| || ||||||||||||||||
Sbjct 91 GTAACGGG-GTCCCGGTGGAAGTCCGGGGCTCT-AGCTGACGTCTTGCAATTTCACCATG 34
Query 252 CGCAGGGATAAATCCTTTGCAGACGAC 278
|| |||||| |||||||||| |||||
Sbjct 33 CGTGGGGATAGATCCTTTGCATACGAC 7
>seq281
Length=211
Score = 224 bits (248), Expect = 2e-56
Identities = 177/207 (86%), Gaps = 4/207 (2%)
Strand=Plus/Minus
Query 74 CATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCAGAACGGGGTGATT 133
|||||||||||| ||||||||||||||||||||||||||||||||||||| | | |||||
Sbjct 211 CATCTGCTGGATAATGGCTGAACGCCTCTAAGTCAGAATCCATGCCAGAAAGCGATGATT 152
Query 134 CTCTCCTGCACATCGTAGTCGGATACGAATAGG-CTTCGGCCCCGAACCTTAGCAGGCCG 192
||||| ||||||||||||||||||||||||| ||| ||||| | | | |||| || ||
Sbjct 151 TTCTCCCACACATCGTAGTCGGATACGAATAGGCCTTTGGCCCTGCATCCTAGCTGGTCG 92
Query 193 GCAACGGGCGTCCC-GCGGAAGCGCGGGGCGCTCAGCTGGCGGATTGCAATTTCACCATG 251
| |||||| ||||| | ||||| |||||| || ||||| || ||||||||||||||||
Sbjct 91 GTAACGGG-GTCCCGGTGGAAGTCCGGGGCTCT-AGCTGACGTCTTGCAATTTCACCATG 34
Query 252 CGCAGGGATAAATCCTTTGCAGACGAC 278
|| |||||| |||||||||| |||||
Sbjct 33 CGTGGGGATAGATCCTTTGCATACGAC 7
>seq552
Length=211
Score = 104 bits (114), Expect = 4e-20
Identities = 93/114 (82%), Gaps = 2/114 (2%)
Strand=Plus/Minus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
|||||||||||||||| | |||||| | ||||| | || | || |||| || || |
Sbjct 209 GTACGAGAGGAACCGCAGG-TTCAGAC-ATTTGGTGTATGTGCTTGGCTGAGGAGCCAAT 152
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCC 114
| |||||||||||||||| |||||||| ||||||||||||||||||||||||
Sbjct 151 GGTGCGAAGCTACCATCTGTGGGATTATGACTGAACGCCTCTAAGTCAGAATCC 98
>seq655
Length=211
Score = 100 bits (110), Expect = 5e-19
Identities = 92/114 (81%), Gaps = 2/114 (2%)
Strand=Plus/Plus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
|||||||||||||||| | |||||| | ||||| | || | || |||| || || |
Sbjct 3 GTACGAGAGGAACCGCAGG-TTCAGAC-ATTTGGTGTATGTGCTTGGCTGAGGAGCCAAT 60
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCC 114
| |||||||||||||||| |||||||| ||||||||||||||| ||||||||
Sbjct 61 GGTGCGAAGCTACCATCTGTGGGATTATGACTGAACGCCTCTAAGGCAGAATCC 114
>seq302
Length=211
Score = 77.0 bits (84), Expect = 5e-12
Identities = 67/81 (83%), Gaps = 2/81 (2%)
Strand=Plus/Minus
Query 199 GGCGTCCCGC-GGAAGCGCGGGGCGCTCAGCTGGCGGATTGCAATTTCACCATGCGCAGG 257
|| |||||| ||||| |||||| || ||||| || |||||||||||||||||| ||
Sbjct 210 GGGGTCCCGGTGGAAGTCCGGGGCTCT-AGCTGACGTCTTGCAATTTCACCATGCGTGGG 152
Query 258 GATAAATCCTTTGCAGACGAC 278
|||| |||||||||| |||||
Sbjct 151 GATAGATCCTTTGCATACGAC 131
>seq104
Length=207
Score = 77.0 bits (84), Expect = 5e-12
Identities = 67/81 (83%), Gaps = 2/81 (2%)
Strand=Plus/Minus
Query 199 GGCGTCCCGC-GGAAGCGCGGGGCGCTCAGCTGGCGGATTGCAATTTCACCATGCGCAGG 257
|| |||||| ||||| |||||| || ||||| || |||||||||||||||||| ||
Sbjct 206 GGGGTCCCGGTGGAAGTCCGGGGCTCT-AGCTGACGTCTTGCAATTTCACCATGCGTGGG 148
Query 258 GATAAATCCTTTGCAGACGAC 278
|||| |||||||||| |||||
Sbjct 147 GATAGATCCTTTGCATACGAC 127
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 819175192064
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |