Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._20BL308_20[genbank_20GCA_5F001630595.1_202016 -05-27] 3,126 sequences; 31,419,026 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq1127 244 2e-62 seq280 228 1e-57 seq281 224 2e-56 seq552 104 4e-20 seq655 100 5e-19 seq302 77.0 5e-12 seq104 77.0 5e-12 >seq1127 Length=293 Score = 244 bits (270), Expect = 2e-62 Identities = 162/176 (92%), Gaps = 3/176 (2%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||||| | |||||| ||||||||||||||||||||||||| ||||||| Sbjct 176 GTACGAGAGGAACCGCTCA-TTCAGA-TAATTGGTTTTTGCGGCTGTCTGACAAGGCAGT 119 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 118 GCCGCGAAGCTACCATCTGCTGGATAATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 59 Query 121 GAACGGGGTGATTCTCTCCTGCACATCGTAGTCGGATACGAATAGG-CTTCGGCCC 175 ||| | | ||||| ||||| ||||||||||||||||||||||||| ||| ||||| Sbjct 58 GAAAGCGATGATTTTCTCCCACACATCGTAGTCGGATACGAATAGGCCTTTGGCCC 3 >seq280 Length=211 Score = 228 bits (252), Expect = 1e-57 Identities = 178/207 (86%), Gaps = 4/207 (2%) Strand=Plus/Minus Query 74 CATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCAGAACGGGGTGATT 133 |||||||||||| ||||||||||||||||||||||||||||||||||||| | | ||||| Sbjct 211 CATCTGCTGGATAATGGCTGAACGCCTCTAAGTCAGAATCCATGCCAGAAAGCGATGATT 152 Query 134 CTCTCCTGCACATCGTAGTCGGATACGAATAGG-CTTCGGCCCCGAACCTTAGCAGGCCG 192 ||||| ||||||||||||||||||||||||| ||| ||||| ||| | |||| || || Sbjct 151 TTCTCCCACACATCGTAGTCGGATACGAATAGGCCTTTGGCCCTGAATCCTAGCTGGTCG 92 Query 193 GCAACGGGCGTCCC-GCGGAAGCGCGGGGCGCTCAGCTGGCGGATTGCAATTTCACCATG 251 | |||||| ||||| | ||||| |||||| || ||||| || |||||||||||||||| Sbjct 91 GTAACGGG-GTCCCGGTGGAAGTCCGGGGCTCT-AGCTGACGTCTTGCAATTTCACCATG 34 Query 252 CGCAGGGATAAATCCTTTGCAGACGAC 278 || |||||| |||||||||| ||||| Sbjct 33 CGTGGGGATAGATCCTTTGCATACGAC 7 >seq281 Length=211 Score = 224 bits (248), Expect = 2e-56 Identities = 177/207 (86%), Gaps = 4/207 (2%) Strand=Plus/Minus Query 74 CATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCAGAACGGGGTGATT 133 |||||||||||| ||||||||||||||||||||||||||||||||||||| | | ||||| Sbjct 211 CATCTGCTGGATAATGGCTGAACGCCTCTAAGTCAGAATCCATGCCAGAAAGCGATGATT 152 Query 134 CTCTCCTGCACATCGTAGTCGGATACGAATAGG-CTTCGGCCCCGAACCTTAGCAGGCCG 192 ||||| ||||||||||||||||||||||||| ||| ||||| | | | |||| || || Sbjct 151 TTCTCCCACACATCGTAGTCGGATACGAATAGGCCTTTGGCCCTGCATCCTAGCTGGTCG 92 Query 193 GCAACGGGCGTCCC-GCGGAAGCGCGGGGCGCTCAGCTGGCGGATTGCAATTTCACCATG 251 | |||||| ||||| | ||||| |||||| || ||||| || |||||||||||||||| Sbjct 91 GTAACGGG-GTCCCGGTGGAAGTCCGGGGCTCT-AGCTGACGTCTTGCAATTTCACCATG 34 Query 252 CGCAGGGATAAATCCTTTGCAGACGAC 278 || |||||| |||||||||| ||||| Sbjct 33 CGTGGGGATAGATCCTTTGCATACGAC 7 >seq552 Length=211 Score = 104 bits (114), Expect = 4e-20 Identities = 93/114 (82%), Gaps = 2/114 (2%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||||| | |||||| | ||||| | || | || |||| || || | Sbjct 209 GTACGAGAGGAACCGCAGG-TTCAGAC-ATTTGGTGTATGTGCTTGGCTGAGGAGCCAAT 152 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCC 114 | |||||||||||||||| |||||||| |||||||||||||||||||||||| Sbjct 151 GGTGCGAAGCTACCATCTGTGGGATTATGACTGAACGCCTCTAAGTCAGAATCC 98 >seq655 Length=211 Score = 100 bits (110), Expect = 5e-19 Identities = 92/114 (81%), Gaps = 2/114 (2%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||||| | |||||| | ||||| | || | || |||| || || | Sbjct 3 GTACGAGAGGAACCGCAGG-TTCAGAC-ATTTGGTGTATGTGCTTGGCTGAGGAGCCAAT 60 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCC 114 | |||||||||||||||| |||||||| ||||||||||||||| |||||||| Sbjct 61 GGTGCGAAGCTACCATCTGTGGGATTATGACTGAACGCCTCTAAGGCAGAATCC 114 >seq302 Length=211 Score = 77.0 bits (84), Expect = 5e-12 Identities = 67/81 (83%), Gaps = 2/81 (2%) Strand=Plus/Minus Query 199 GGCGTCCCGC-GGAAGCGCGGGGCGCTCAGCTGGCGGATTGCAATTTCACCATGCGCAGG 257 || |||||| ||||| |||||| || ||||| || |||||||||||||||||| || Sbjct 210 GGGGTCCCGGTGGAAGTCCGGGGCTCT-AGCTGACGTCTTGCAATTTCACCATGCGTGGG 152 Query 258 GATAAATCCTTTGCAGACGAC 278 |||| |||||||||| ||||| Sbjct 151 GATAGATCCTTTGCATACGAC 131 >seq104 Length=207 Score = 77.0 bits (84), Expect = 5e-12 Identities = 67/81 (83%), Gaps = 2/81 (2%) Strand=Plus/Minus Query 199 GGCGTCCCGC-GGAAGCGCGGGGCGCTCAGCTGGCGGATTGCAATTTCACCATGCGCAGG 257 || |||||| ||||| |||||| || ||||| || |||||||||||||||||| || Sbjct 206 GGGGTCCCGGTGGAAGTCCGGGGCTCT-AGCTGACGTCTTGCAATTTCACCATGCGTGGG 148 Query 258 GATAAATCCTTTGCAGACGAC 278 |||| |||||||||| ||||| Sbjct 147 GATAGATCCTTTGCATACGAC 127 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 819175192064