Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._20VKM_20F- 103_20[genbank_20GCA_5F000750895.1_202014-09-09] 1,794 sequences; 30,255,792 total letters Query= AAMG01000636.1 Length=426 Score E Sequences producing significant alignments: (Bits) Value seq1693 100 7e-19 >seq1693 Length=6975 Score = 100 bits (110), Expect = 7e-19 Identities = 194/282 (69%), Gaps = 11/282 (4%) Strand=Plus/Plus Query 7 TACACTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCC 66 || |||| |||| ||||| ||| ||||||||||||| | | |||||||| Sbjct 5312 TAAACTGTATCTGCACAGTTATTCCAATTTCACTGAGCCAATCATTGAGACAGCTGTTGT 5371 Query 67 ATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGA 126 ||||||| ||||| |||| | | | | ||| | | || || ||| ||||||||||||| Sbjct 5372 ATCGTTAAATCATTCATGCAAGACCGCATTTAACGGCCAGGGTATTCCGCTACCTTAGGA 5431 Query 127 CCGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAA----GAGCTT---CGCGTT 179 || | | || ||||||| || | ||||| ||| |||| ||||| || Sbjct 5432 CCCTCA-AAATAAGGCCGCCATTGATCGGGGTTTCCTTCAAAGTCAAGCTTATATTAGTC 5490 Query 180 AGCTAACCCCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACT 239 | || | | ||| |||||| ||| || ||||||| |||||| | |||| | | | Sbjct 5491 AACTTAACAAATCCGTTAACCAGCCGACATCGGGCAGAAATCACACTCAATACTTTGATT 5550 Query 240 T-TCGTGTT--TGCAGAGTGCTGTGTTTTTAATAAACAGTCG 278 | | | || ||||||||||| |||||| | |||||||||| Sbjct 5551 TATTATCTTACTGCAGAGTGCTTTGTTTTAATTAAACAGTCG 5592 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1260777381248