Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._20VKM_20F- 103_20[genbank_20GCA_5F000750895.1_202014-09-09] 1,794 sequences; 30,255,792 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq1450 331 2e-88 seq846 93.3 7e-17 >seq1450 Length=848 Score = 331 bits (366), Expect = 2e-88 Identities = 246/280 (88%), Gaps = 6/280 (2%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||||| | |||||| ||||||||||||||||||||||||| ||||||| Sbjct 763 GTACGAGAGGAACCGCTCA-TTCAGA-TAATTGGTTTTTGCGGCTGTCTGACAAGGCAGT 706 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 705 GCCGCGAAGCTACCATCTGCTGGATAATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 646 Query 121 GAACGGGGTGATTCTCTCCTGCACATCGTAGTCGGATACGAATAGG-CTTCGGCCCCGAA 179 ||| | | ||||| ||||| ||||||||||||||||||||||||| ||| ||||| ||| Sbjct 645 GAAAGCGATGATTTTCTCCCACACATCGTAGTCGGATACGAATAGGCCTTTGGCCCTGAA 586 Query 180 CCTTAGCAGGCCGGCAACGGGCGTCCC-GCGGAAGCGCGGGGCGCTCAGCTGGCGGATTG 238 | |||| || ||| |||||| ||||| | ||||| |||||| || ||||| || ||| Sbjct 585 TCCTAGCTGGTCGGTAACGGG-GTCCCGGTGGAAGTCCGGGGCTCT-AGCTGACGTCTTG 528 Query 239 CAATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278 ||||||||||||||| |||||| |||||||||| ||||| Sbjct 527 CAATTTCACCATGCGTGGGGATAGATCCTTTGCATACGAC 488 >seq846 Length=91497 Score = 93.3 bits (102), Expect = 7e-17 Identities = 67/75 (89%), Gaps = 2/75 (3%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||||| | |||||| ||||||| ||||||||||||||||| || ||| Sbjct 24988 GTACGAGAGGAACCGCTCA-TTCAGA-TAATTGGGTTTTGCGGCTGTCTGACAGGGGAGT 25045 Query 61 GCCGCGAAGCTACCA 75 ||||||||||||||| Sbjct 25046 GCCGCGAAGCTACCA 25060 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 819185762816