Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._20VKM_20F- 103_20[genbank_20GCA_5F000750895.1_202014-09-09] 1,794 sequences; 30,255,792 total letters Query= NC_032108.1 Length=589068 Score E Sequences producing significant alignments: (Bits) Value seq1744 93.3 2e-13 >seq1744 Length=13726 Score = 93.3 bits (102), Expect = 2e-13 Identities = 112/147 (76%), Gaps = 4/147 (3%) Strand=Plus/Plus Query 364425 CAATAGTCATACGAGAGGGAATGGAGAGAGGGTTGATGATGATGTCAGGCACCATGCCGT 364484 |||| ||||||||||| ||||||| | | ||||||||||||| ||||||||| | || | Sbjct 6799 CAATCGTCATACGAGAAGGAATGGCGTGGGGGTTGATGATGAGGTCAGGCACAACACCCT 6858 Query 364485 CAGCG-GTAAAGGGCATAT-CTTCGGGAGGAACGATGAGACCAATGGTTCCCTTTTGCGC 364542 | ||| || || ||||||| || | || || | | | | |||||| ||||| || || | Sbjct 6859 C-GCGAGTGAAAGGCATATCCTCCTGGCGGTAAG-TAATACCAATTGTTCCTTTCTGTCC 6916 Query 364543 ATAGCGAGAAGCAAACTTGTCGCCAAT 364569 | ||||| || ||||| || ||||| Sbjct 6917 GTGACGAGAGGCGAACTTATCACCAAT 6943 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1884843074708042