Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._20VKM_20F- 3557_20[genbank_20GCA_5F000750665.1_202014-09-09] 3,339 sequences; 27,649,855 total letters Query= AAMG01000636.1 Length=426 Score E Sequences producing significant alignments: (Bits) Value seq3318 95.1 3e-17 >seq3318 Length=9850 Score = 95.1 bits (104), Expect = 3e-17 Identities = 194/282 (69%), Gaps = 11/282 (4%) Strand=Plus/Minus Query 7 TACACTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCC 66 || |||| |||| ||||| ||| ||||||||||||| | | |||||||| Sbjct 2679 TAAACTGTATCTGCACAGTTATTCCAATTTCACTGAGCCAATCATTGAGACAGCTGTTGT 2620 Query 67 ATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGA 126 ||||||| ||||| |||| | | | | ||| | | || || ||| ||||||||||||| Sbjct 2619 ATCGTTAAATCATTCATGCAAGACCGCATTTAACGGCCAGGGTATTCCGCTACCTTAGGA 2560 Query 127 CCGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCA-AG---AGCTT---CGCGTT 179 || | | || ||||||| || | ||||| ||| ||| || ||||| || Sbjct 2559 CCCTCA-AAATAAGGCCGCCATTGATCGGGGTTTCCTTCACAGTCAAGCTTATATTAGTC 2501 Query 180 AGCTAACCCCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACT 239 | || | | || |||||| ||| || ||||||| |||||| | |||| | | | Sbjct 2500 AACTTAACTATTCCGTTAACCAGCCGACATCGGGCAGAAATCACACTCAATACTTTGATT 2441 Query 240 T-TCGTGTT--TGCAGAGTGCTGTGTTTTTAATAAACAGTCG 278 | | | || ||||||||||| |||||| | |||||||||| Sbjct 2440 TATTATCTTACTGCAGAGTGCTTTGTTTTAATTAAACAGTCG 2399 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1260757901888