Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._20VKM_20F- 3557_20[genbank_20GCA_5F000750665.1_202014-09-09] 3,339 sequences; 27,649,855 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq3284 282 7e-74 seq3119 84.2 3e-14 >seq3284 Length=5585 Score = 282 bits (312), Expect = 7e-74 Identities = 184/201 (92%), Gaps = 1/201 (0%) Strand=Plus/Minus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61 ||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 200 ACTCGTTGGCTCTGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 141 Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCC 121 |||||||||||||||||||||||| |||| | |||| |||||||||||||||||||||| Sbjct 140 CCTGTTATTGCCTCAAACTTCCATCGGCTTG-AGCCGATAGTCCCTCTAAGAAGCCAGCG 82 Query 122 ACCAACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAA 181 |||| ||| || |||||||||||||||||||||||||||||||||||| |||||| Sbjct 81 ACCAGCCAAAGCTAGCCGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGCAATTAA 22 Query 182 CCAGACAAATCACTCCACCAA 202 |||||||||||||||||||| Sbjct 21 GCAGACAAATCACTCCACCAA 1 >seq3119 Length=2071 Score = 84.2 bits (92), Expect = 3e-14 Identities = 51/54 (94%), Gaps = 0/54 (0%) Strand=Plus/Plus Query 205 AAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 ||||||||||||||||||||||||| | ||||||||||||||| |||||||||| Sbjct 1 AAGAACGGCCATGCACCACCACCCACAAAATCAAGAAAGAGCTCTCAATCTGTC 54 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796774226259