Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._20VKM_20F- 3557_20[genbank_20GCA_5F000750665.1_202014-09-09] 3,339 sequences; 27,649,855 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq3284 370 2e-100 seq1468 86.0 1e-14 >seq3284 Length=5585 Score = 370 bits (410), Expect = 2e-100 Identities = 205/205 (100%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 91 TTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGA 150 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 3892 TTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGA 3833 Query 151 CATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCC 210 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 3832 CATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCC 3773 Query 211 CTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGG 270 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 3772 CTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGG 3713 Query 271 CCACACTTTCATGGTTTGTATTCAC 295 ||||||||||||||||||||||||| Sbjct 3712 CCACACTTTCATGGTTTGTATTCAC 3688 Score = 134 bits (148), Expect = 2e-29 Identities = 79/82 (96%), Gaps = 0/82 (0%) Strand=Plus/Minus Query 11 AATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTA 70 ||||||||||| | |||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 4340 AATTACCATTGCGACGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTA 4281 Query 71 AACCCAGCTCACGTTCCCTATT 92 |||||||||||||||||||||| Sbjct 4280 AACCCAGCTCACGTTCCCTATT 4259 >seq1468 Length=4038 Score = 86.0 bits (94), Expect = 1e-14 Identities = 60/67 (90%), Gaps = 1/67 (1%) Strand=Plus/Minus Query 229 CACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTG 288 ||| ||||||||||||||||||||| |||| |||||||||||| |||||| || ||||| Sbjct 419 CACGTCTAGCCTCAAATTTCGAGGGTCTAA-GGATCGATAGGCTACACTTATATTGTTTG 361 Query 289 TATTCAC 295 ||||||| Sbjct 360 TATTCAC 354 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 854371471584