Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20sp._20VKM_20F-
3557_20[genbank_20GCA_5F000750665.1_202014-09-09] 3,339 sequences; 27,649,855 total letters
Query= AAMG01000941.1
Length=299
Score E
Sequences producing significant alignments: (Bits) Value
seq3284 370 2e-100
seq1468 86.0 1e-14
>seq3284
Length=5585
Score = 370 bits (410), Expect = 2e-100
Identities = 205/205 (100%), Gaps = 0/205 (0%)
Strand=Plus/Minus
Query 91 TTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGA 150
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3892 TTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGA 3833
Query 151 CATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCC 210
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3832 CATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCC 3773
Query 211 CTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGG 270
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3772 CTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGG 3713
Query 271 CCACACTTTCATGGTTTGTATTCAC 295
|||||||||||||||||||||||||
Sbjct 3712 CCACACTTTCATGGTTTGTATTCAC 3688
Score = 134 bits (148), Expect = 2e-29
Identities = 79/82 (96%), Gaps = 0/82 (0%)
Strand=Plus/Minus
Query 11 AATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTA 70
||||||||||| | |||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 4340 AATTACCATTGCGACGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTA 4281
Query 71 AACCCAGCTCACGTTCCCTATT 92
||||||||||||||||||||||
Sbjct 4280 AACCCAGCTCACGTTCCCTATT 4259
>seq1468
Length=4038
Score = 86.0 bits (94), Expect = 1e-14
Identities = 60/67 (90%), Gaps = 1/67 (1%)
Strand=Plus/Minus
Query 229 CACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTG 288
||| ||||||||||||||||||||| |||| |||||||||||| |||||| || |||||
Sbjct 419 CACGTCTAGCCTCAAATTTCGAGGGTCTAA-GGATCGATAGGCTACACTTATATTGTTTG 361
Query 289 TATTCAC 295
|||||||
Sbjct 360 TATTCAC 354
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 854371471584
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |