Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._20VKM_20F- 3557_20[genbank_20GCA_5F000750665.1_202014-09-09] 3,339 sequences; 27,649,855 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq3284 331 2e-88 >seq3284 Length=5585 Score = 331 bits (366), Expect = 2e-88 Identities = 246/280 (88%), Gaps = 6/280 (2%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||||| | |||||| ||||||||||||||||||||||||| ||||||| Sbjct 4348 GTACGAGAGGAACCGCTCA-TTCAGA-TAATTGGTTTTTGCGGCTGTCTGACAAGGCAGT 4405 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 4406 GCCGCGAAGCTACCATCTGCTGGATAATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 4465 Query 121 GAACGGGGTGATTCTCTCCTGCACATCGTAGTCGGATACGAATAGG-CTTCGGCCCCGAA 179 ||| | | ||||| ||||| ||||||||||||||||||||||||| ||| ||||| ||| Sbjct 4466 GAAAGCGATGATTTTCTCCCACACATCGTAGTCGGATACGAATAGGCCTTTGGCCCTGAA 4525 Query 180 CCTTAGCAGGCCGGCAACGGGCGTCCC-GCGGAAGCGCGGGGCGCTCAGCTGGCGGATTG 238 | |||| || ||| |||||| ||||| | ||||| |||||| || ||||| || ||| Sbjct 4526 TCCTAGCTGGTCGGTAACGGG-GTCCCGGTGGAAGTCCGGGGCTCT-AGCTGACGTCTTG 4583 Query 239 CAATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278 ||||||||||||||| |||||| |||||||||| ||||| Sbjct 4584 CAATTTCACCATGCGTGGGGATAGATCCTTTGCATACGAC 4623 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 819173501696