Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20sp._20VKM_20F-
3557_20[genbank_20GCA_5F000750665.1_202014-09-09] 3,339 sequences; 27,649,855 total letters
Query= AAMG01002236.1
Length=287
Score E
Sequences producing significant alignments: (Bits) Value
seq3284 331 2e-88
>seq3284
Length=5585
Score = 331 bits (366), Expect = 2e-88
Identities = 246/280 (88%), Gaps = 6/280 (2%)
Strand=Plus/Plus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
|||||||||||||||| | |||||| ||||||||||||||||||||||||| |||||||
Sbjct 4348 GTACGAGAGGAACCGCTCA-TTCAGA-TAATTGGTTTTTGCGGCTGTCTGACAAGGCAGT 4405
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 4406 GCCGCGAAGCTACCATCTGCTGGATAATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 4465
Query 121 GAACGGGGTGATTCTCTCCTGCACATCGTAGTCGGATACGAATAGG-CTTCGGCCCCGAA 179
||| | | ||||| ||||| ||||||||||||||||||||||||| ||| ||||| |||
Sbjct 4466 GAAAGCGATGATTTTCTCCCACACATCGTAGTCGGATACGAATAGGCCTTTGGCCCTGAA 4525
Query 180 CCTTAGCAGGCCGGCAACGGGCGTCCC-GCGGAAGCGCGGGGCGCTCAGCTGGCGGATTG 238
| |||| || ||| |||||| ||||| | ||||| |||||| || ||||| || |||
Sbjct 4526 TCCTAGCTGGTCGGTAACGGG-GTCCCGGTGGAAGTCCGGGGCTCT-AGCTGACGTCTTG 4583
Query 239 CAATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278
||||||||||||||| |||||| |||||||||| |||||
Sbjct 4584 CAATTTCACCATGCGTGGGGATAGATCCTTTGCATACGAC 4623
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 819173501696
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |