Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._20VKM_20F- 3557_20[genbank_20GCA_5F000750665.1_202014-09-09] 3,339 sequences; 27,649,855 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq1479 286 3e-72 seq2510 174 1e-38 >seq1479 Length=10203 Score = 286 bits (316), Expect = 3e-72 Identities = 634/942 (67%), Gaps = 8/942 (1%) Strand=Plus/Minus Query 66002 GGAAGGGCAAGAGATGCGAGGTTGCAGACAGCTATCTCGTCAGGAGCGGTATACTCGACA 66061 ||||||||||| ||||| | ||| || || || | ||| || ||||| | ||||||||| Sbjct 7358 GGAAGGGCAAGGGATGCCAAGTTACACACGGCAACCTCATCTGGAGCAGAGTACTCGACA 7299 Query 66062 ATTTCGGTGCACAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTGATTACTCTTGCGA 66121 || || |||||||| ||| || ||| ||||| || | |||| || || |||||||| Sbjct 7298 ATCTCCGTGCACAGGTTAGAGCTGCGGATGGTACCGAGGTTCTTCTGGTTGCTCTTGCGG 7239 Query 66122 TTGCATGCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTGGGACTCAATGATG 66181 ||||| ||||||||||||| |||| | || | || |||||| || ||||| | ||| Sbjct 7238 TTGCAAGCATCCTTGTACAACATGAAAGGGTTTCCTGTCTCAGTCTGAGACTCGAGAATG 7179 Query 66182 GCGTGCCAAAGAGCGCGTGCCTTCACCGTACGTACCGCCCTACCTTTGCGT-TCGTAATG 66240 | || |||||| | ||||| | || | | | |||| | | | || ||||| | Sbjct 7178 GAGTACCAAAGCTTCTGGGCCTTGATGGT-CTTGCGACCCTTCTTCTCCGACTCGTATTT 7120 Query 66241 TTCGTAGAGGTGTTCGAAGGATTCACCCCATACTTCGGACAGACATGGACACTTGTGTGG 66300 |||||||| ||||| ||||| | || || | || | || || | || || Sbjct 7119 CTCGTAGAGAGCCTCGAACTCATCACCGTAAACGTCCGCCAATCCAGGGCATTCGTTGGG 7060 Query 66301 ACACATCAGCGACCAATCACCATCCTGTTCTACACGACGCATAAATAGATCAGGTATCCA 66360 ||||| || | ||| ||||| | || || ||||| ||| || ||||| || ||||| Sbjct 7059 GCACATGAGAGTCCAGTCACCGTTCTTCTCAACACGCTTCATGAAGAGATCCGGGATCCA 7000 Query 66361 GAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAATGCCGTGATTTTTGCGCAAGTC 66420 ||| |||||||| | || || || || ||||| ||||||| || || | |||||| Sbjct 6999 GAGAGCGTAGAACAAGTCACGGGCACGGACTTCCTCCTTGCCGTGGTTCTTCCTCAAGTC 6940 Query 66421 GAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCATACG 66480 | |||||| |||| || || |||||||| || | ||||||||||| | || || Sbjct 6939 CAAGAACTCGAAGACATCAGCGTGCCATGGCTCAACATAGATGGCGAAGGCACCAGGGCG 6880 Query 66481 TTTGCCGCCACCTTGGTCGACGTAGCGAGCGACATTGTTGAAGACACGCAACATCGGTAC 66540 ||| |||||| ||||| ||||| | || ||||||||||| || | ||| || || Sbjct 6879 CTTGTTGCCACCCTGGTCAACGTATCTGGCAGTGTTGTTGAAGACGCGGAGCATGGGAAC 6820 Query 66541 GAGCCCGTTAGATTTGCCATTGGTGCCGTCGATGGGGGATCCTCGTGCCCGTATATCGTG 66600 || ||||| || || || ||||| ||| | ||| | || || || ||| || Sbjct 6819 GATACCGTTCGAGTTTCCGTTGGTACCGGCAATGTATGCACCGGTGGCACGGATACGATG 6760 Query 66601 AACATTCAGACCAATACCACCGGCCGTCTTCGAGATGGCAGCACAATCGGCCACTGTCCG 66660 | |||| || ||||| ||||| ||||| ||||| ||||| | ||| Sbjct 6759 GATGTTCAATCCGATACCTCCGGCAGTCTTTGAGATCATGGCACATGTCTTGAGTGTGTC 6700 Query 66661 GAATATGCCGTCAATGGAGTCACCCTTGATGGTCAGGAGGTAGCATGAACTAAGTTGGGG 66720 | || || ||||| || |||| ||| | | | |||| || || |||| Sbjct 6699 ATAGATACCCTCAATACTATCCTCCTTCATGTCGACCAAGAAGCAGGATGACAGCTGGGC 6640 Query 66721 TTTGGGTGTGGCGGCCGAGAAGAGGGTGGGTGTAGCGTGCGTAAAGTAATGGCGAGACAT 66780 | ||||| | || |||||| || || | ||||| || ||||| | | |||||| Sbjct 6639 CTGTGGTGTACCAGCATTGAAGAGTGTTGGGGAGGCGTGTGTGAAGTATTTGGAAGACAT 6580 Query 66781 GTAATTGTACGTCTCGATGACAGCATCAATGTTTTCGCCATGAATCCCGAGTG-CACATC 66839 | ||||| ||||| ||| | ||||| | ||||| ||||| || | | |||| | Sbjct 6579 GAGGTTGTATGTCTCAATGGCCTTCTCAATATCCTCGCCGTGAATGCCAACCGCCACA-C 6521 Query 66840 GCATCAGGAGGTATTGAGGCCGTTCGACCAGCCGATCCTTGATATGC--ATTAAGTAGGA 66897 |||| | | || || |||| ||| | || | || | | | || | | ||| || Sbjct 6520 GCATAATCATGTGCTGTGGCCTTTC-AGCAACGTTGCCATCA-AGGCGGAGAAGGTATGA 6463 Query 66898 GCGTTCCAGGGTCTTGATACCAAAGTACGAGTAATTGAAATC 66939 || || |||||||||| |||||||| ||| |||||||| Sbjct 6462 ACGCTCAAGGGTCTTGAAGCCAAAGTATTGGTAGTTGAAATC 6421 >seq2510 Length=23295 Score = 174 bits (192), Expect = 1e-38 Identities = 561/855 (66%), Gaps = 18/855 (2%) Strand=Plus/Plus Query 61087 ATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTG 61146 || |||| |||||||| ||||||||||| || |||||||| | |||||| | || | Sbjct 9129 ATCTGGCAGATGTACAAGAAGGCGGAAGCGTCTTTCTGGACTGCAGAGGAGATTGACCTC 9188 Query 61147 TCCAAAGACATGAATGACTGG---GAGCGT-TTATCGAGCGGTGAACAACATTTCATTAA 61202 ||||| ||| | | |||||| | ||| | | || || ||| | | ||||| Sbjct 9189 TCCAAGGACCTTCACGACTGGAACAACCGTCTCAATGA-CGATGAGCGCTACTTCATCTC 9247 Query 61203 ACATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACG 61262 || || | || ||||| ||||| || ||||| || ||||| ||||| | | || || Sbjct 9248 CCACGTTCTCGCTTTCTTCGCCGCGTCTGACGGAATTGTCAACGAGAACCTCCTCGAGCG 9307 Query 61263 TTTCGCGCAG-GAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCA 61321 ||| |||| ||||| ||| | | ||||| || || |||||||| ||||| || | Sbjct 9308 CTTC-AGCAGCGAGGTTCAAATCCCAGAGGCCCGCTGCTTCTACGGTTTCCAAATCATGA 9366 Query 61322 TGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCGGG 61381 | ||||| | ||| | |||| ||| | |||||||| || ||||||| ||||| || Sbjct 9367 TCGAGAACATTCACGCCGAGACATACTCCCTCCTCATCGACACATACATCAAGGAGCAGG 9426 Query 61382 CGGAACGTGAACGATTGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAAGCGG 61441 | | || | | ||||||||||||||||| || || | ||| ||| || | Sbjct 9427 CCCAGCGCACATACCTCTTCAATGCCATCGAGACCATCCCTTGCATCAAGAAGAAGGCCG 9486 Query 61442 ATTGGGCCTTCAATTGGATCACCAGTACAACG--GCTACATTTGGTGAACGATTGCTGGC 61499 | ||||| ||| ||||| ||| |||| | | || |||| | || || | || Sbjct 9487 ACTGGGCTGTCAGGTGGAT--CCAAGACAAGGATTCCACCTTTGCCCAGCGCCTGGTTGC 9544 Query 61500 ATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAA 61559 || || | || |||||| | || ||| || ||||| ||| | || || ||| | || Sbjct 9545 CTTCGCTGCCGTTGAGGGTATCTTCTTCTCCGGCTCGTTCGCCTCTATTTTCTGGCTCAA 9604 Query 61560 GAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAGGG 61619 ||| ||||| || ||| | || || || ||| ||| ||| | || || ||||| ||||| Sbjct 9605 GAAGCGTGGTCTCATGGCTGGCCTCACTTTCTCCAACGAGCTCATCTCCCGCGATGAGGG 9664 Query 61620 CATGCATTGTGATTTTGCTGTTTTGCTATTCAAACGCTATCTGGTGAATCGTCCGTCGGA 61679 | || ||| || || | || ||| ||| | || | || || | Sbjct 9665 TCTCCACACTGACTTCGCCTGCCTCCTCTTC--TCGC-ACCTTAGACACCGCCCAAGCAA 9721 Query 61680 GGAGCGTGTGGGTGAGATTGTTCGTGAGGCGGTAACTATCGAACAGGAATTTCTGACTGA 61739 | || ||| || | | ||||| || | ||||| || || || |||| || Sbjct 9722 GCAGGCTGTCCAGGATGTCATCACCGAGGCTGTCGCGATCGAGCAAGAGTTCTTGACAGA 9781 Query 61740 CGCTTTGCCCGTCT-CACTCATCGGCATGAATTGTGGAC-TAATGTCGCAGTATATTGAA 61797 || | ||| | | | || |||||||||| | || | ||| ||| || ||||| Sbjct 9782 GGCACT-CCCATGTGCGCTGCTCGGCATGAA-CGCCAACTTGATGAAGCAATACATTGAG 9839 Query 61798 TTTGTTGCCGACCGTCTGTTGGTCGATTTGGGTATGAAGCGGATCTATAATACGAAAAAC 61857 || || |||||| | ||| || | | | |||| || | |||| || | | ||| Sbjct 9840 TTCGTCGCCGACAGGCTGCTGCTTTCTCTCGGTAACGAGAAGTTCTACAAGTCTACCAAC 9899 Query 61858 CCATTTGATTTCATGGACATGATTTCGCTGGATGGCAAGACGAATTTTTTCGAGAAACGT 61917 || || || |||||||| | || || |||| || ||||| || || || ||||| ||| Sbjct 9900 CCCTTCGACTTCATGGAGAACATCTCCCTGGCAGGAAAGACCAACTTCTTTGAGAAGCGT 9959 Query 61918 GTAGGCGACTATCAA 61932 || | |||||| ||| Sbjct 9960 GTCGCCGACTACCAA 9974 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397551821342960