Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._20VKM_20F- 3557_20[genbank_20GCA_5F000750665.1_202014-09-09] 3,339 sequences; 27,649,855 total letters Query= NC_032108.1 Length=589068 Score E Sequences producing significant alignments: (Bits) Value seq1480 129 2e-24 >seq1480 Length=20701 Score = 129 bits (142), Expect = 2e-24 Identities = 120/147 (82%), Gaps = 4/147 (3%) Strand=Plus/Minus Query 364425 CAATAGTCATACGAGAGGGAATGGAGAGAGGGTTGATGATGATGTCAGGCACCATGCCGT 364484 |||| ||||||||||| ||||||| | | ||||||||||||| ||||||||| || || | Sbjct 6727 CAATCGTCATACGAGAAGGAATGGCGTGGGGGTTGATGATGAGGTCAGGCACAATACCCT 6668 Query 364485 CAGCG-GTAAAGGGCATATCTTCG-GGAGGAACGATGAGACCAATGGTTCCCTTTTGCGC 364542 | ||| || || ||||||||||| || || | | ||| |||||||||||| ||||| | Sbjct 6667 C-GCGAGTGAAAGGCATATCTTCTTGGCGGTAGG-TGATACCAATGGTTCCTTTTTGTCC 6610 Query 364543 ATAGCGAGAAGCAAACTTGTCGCCAAT 364569 | ||||||||| |||||||| ||||| Sbjct 6609 GTGGCGAGAAGCGAACTTGTCACCAAT 6583 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1884805762792727