Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._20VKM_20F- 3775_20[genbank_20GCA_5F000750715.1_202014-09-09] 6,880 sequences; 28,506,885 total letters Query= AAMG01000811.1 Length=502 Score E Sequences producing significant alignments: (Bits) Value seq6414 109 2e-21 >seq6414 Length=1898 Score = 109 bits (120), Expect = 2e-21 Identities = 140/192 (73%), Gaps = 1/192 (1%) Strand=Plus/Plus Query 296 GGGACGACGTCAAATCATCATGCCCCTTATGATTTGGGCTACACACGTGCTACAATGGAC 355 ||||| | | ||| |||||||| || | || | ||||||| | |||||| ||| | | Sbjct 1180 GGGACCAAGGCAAGTCATCATGACCTTAATATTGTGGGCTATAGACGTGCCACATAGTCC 1239 Query 356 AATACAAAGGGCAGCGAAACCGCGAGGTCAAGCAAATCCCATAAAGTTGTTCTCAGTTCG 415 |||||||| | || ||| | || | |||| |||| || ||||| | | | | Sbjct 1240 TATACAAAGAGATGCAAAAATGTGAATTTAAGCTAATCTCA-AAAGTAGGATATAATACT 1298 Query 416 GATTGTAGTCTGCAACTCGACTATATGAAGCTGGAATCGCTAGTAATCGTAGATCAGCAT 475 ||||||||||| |||||||||| |||||| ||||| ||||||||||| |||| ||| Sbjct 1299 AATTGTAGTCTGTAACTCGACTACATGAAGAAGGAATTACTAGTAATCGTGAATCACCAT 1358 Query 476 GCTACGGTGAAT 487 | ||||||||| Sbjct 1359 GTCACGGTGAAT 1370 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1503896524800