Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._20VKM_20F- 3775_20[genbank_20GCA_5F000750715.1_202014-09-09] 6,880 sequences; 28,506,885 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq6322 493 2e-137 seq6801 111 3e-22 seq4094 104 4e-20 >seq6322 Length=1637 Score = 493 bits (546), Expect = 2e-137 Identities = 278/281 (99%), Gaps = 0/281 (0%) Strand=Plus/Minus Query 11 AATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTA 70 ||||||||||| | |||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 281 AATTACCATTGCGACGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTA 222 Query 71 AACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTC 130 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 221 AACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTC 162 Query 131 GGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGG 190 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 161 GGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGG 102 Query 191 CTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGA 250 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 101 CTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGA 42 Query 251 GGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTAT 291 ||||||||||||||||||||||||||||||||||||||||| Sbjct 41 GGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTAT 1 >seq6801 Length=5450 Score = 111 bits (122), Expect = 3e-22 Identities = 61/61 (100%), Gaps = 0/61 (0%) Strand=Plus/Minus Query 235 TAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCA 294 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 5450 TAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCA 5391 Query 295 C 295 | Sbjct 5390 C 5390 >seq4094 Length=8418 Score = 104 bits (114), Expect = 4e-20 Identities = 57/57 (100%), Gaps = 0/57 (0%) Strand=Plus/Plus Query 235 TAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTAT 291 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1 TAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTAT 57 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 854341217280