Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20sp._20VKM_20F-
3775_20[genbank_20GCA_5F000750715.1_202014-09-09] 6,880 sequences; 28,506,885 total letters
Query= AAMG01000941.1
Length=299
Score E
Sequences producing significant alignments: (Bits) Value
seq6322 493 2e-137
seq6801 111 3e-22
seq4094 104 4e-20
>seq6322
Length=1637
Score = 493 bits (546), Expect = 2e-137
Identities = 278/281 (99%), Gaps = 0/281 (0%)
Strand=Plus/Minus
Query 11 AATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTA 70
||||||||||| | |||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 281 AATTACCATTGCGACGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTA 222
Query 71 AACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTC 130
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 221 AACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTC 162
Query 131 GGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGG 190
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 161 GGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGG 102
Query 191 CTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGA 250
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 101 CTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGA 42
Query 251 GGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTAT 291
|||||||||||||||||||||||||||||||||||||||||
Sbjct 41 GGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTAT 1
>seq6801
Length=5450
Score = 111 bits (122), Expect = 3e-22
Identities = 61/61 (100%), Gaps = 0/61 (0%)
Strand=Plus/Minus
Query 235 TAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCA 294
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 5450 TAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCA 5391
Query 295 C 295
|
Sbjct 5390 C 5390
>seq4094
Length=8418
Score = 104 bits (114), Expect = 4e-20
Identities = 57/57 (100%), Gaps = 0/57 (0%)
Strand=Plus/Plus
Query 235 TAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTAT 291
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 TAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTAT 57
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 854341217280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |