Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._20VKM_20F- 3775_20[genbank_20GCA_5F000750715.1_202014-09-09] 6,880 sequences; 28,506,885 total letters Query= AAMG01001382.1 Length=124 Score E Sequences producing significant alignments: (Bits) Value seq6801 84.2 1e-14 >seq6801 Length=5450 Score = 84.2 bits (92), Expect = 1e-14 Identities = 64/72 (89%), Gaps = 3/72 (4%) Strand=Plus/Minus Query 39 TCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAG 98 |||||||| |||||| |||| || || ||||||||| ||||||||||| |||||||||| Sbjct 2096 TCCGAAAGC-CTCACTTAGCCGTT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAG 2040 Query 99 GGCAGGGACGTA 110 |||||||||||| Sbjct 2039 GGCAGGGACGTA 2028 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 300780598400