Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._20VKM_20F- 3775_20[genbank_20GCA_5F000750715.1_202014-09-09] 6,880 sequences; 28,506,885 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq6801 877 0.0 seq2312 181 3e-43 seq4142 156 1e-35 >seq6801 Length=5450 Score = 877 bits (972), Expect = 0.0 Identities = 497/504 (99%), Gaps = 0/504 (0%) Strand=Plus/Minus Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct 931 GTACTCATTCCAATTACAAGACTCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 872 Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 871 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 812 Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180 |||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||| Sbjct 811 TCTCAGGCTCCCTCTCCGGAATAGAACCCTAATTCCCCGTTACCCGTTGAAACCATGGTA 752 Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 751 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCA 692 Query 241 CAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGGT 300 ||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||| Sbjct 691 CAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGAGCATTGGT 632 Query 301 TTTTTATCTAATAAATACACCCCTTCCGAAGTCGGGGTTTTTAGCATGTATTAGCTCTAG 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 631 TTTTTATCTAATAAATACACCCCTTCCGAAGTCGGGGTTTTTAGCATGTATTAGCTCTAG 572 Query 361 AATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATGA 420 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 571 AATTACCACGGTTATCCAAGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATGA 512 Query 421 GCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTTTG 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 511 GCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTTTG 452 Query 481 AGACAAGCATATGACTACTGGCAG 504 |||||||||||||||||||||||| Sbjct 451 AGACAAGCATATGACTACTGGCAG 428 >seq2312 Length=675 Score = 181 bits (200), Expect = 3e-43 Identities = 102/103 (99%), Gaps = 0/103 (0%) Strand=Plus/Plus Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct 306 GTACTCATTCCAATTACAAGACTCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 365 Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCT 103 ||||||||||||||||||||||||||||||||||||||||||| Sbjct 366 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCT 408 >seq4142 Length=6275 Score = 156 bits (172), Expect = 1e-35 Identities = 86/86 (100%), Gaps = 0/86 (0%) Strand=Plus/Minus Query 419 GAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTT 478 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1165 GAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTT 1106 Query 479 TGAGACAAGCATATGACTACTGGCAG 504 |||||||||||||||||||||||||| Sbjct 1105 TGAGACAAGCATATGACTACTGGCAG 1080 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510296084480