Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._20VKM_20F- 3775_20[genbank_20GCA_5F000750715.1_202014-09-09] 6,880 sequences; 28,506,885 total letters Query= NC_032108.1 Length=589068 Score E Sequences producing significant alignments: (Bits) Value seq4817 111 6e-19 >seq4817 Length=13321 Score = 111 bits (122), Expect = 6e-19 Identities = 116/147 (79%), Gaps = 4/147 (3%) Strand=Plus/Minus Query 364425 CAATAGTCATACGAGAGGGAATGGAGAGAGGGTTGATGATGATGTCAGGCACCATGCCGT 364484 |||| ||||||||||||||||| | | | |||||||| |||| ||||||||| || || | Sbjct 6681 CAATCGTCATACGAGAGGGAATAGCGTGGGGGTTGATAATGAGGTCAGGCACAATACCCT 6622 Query 364485 CAGCG-GTAAAGGGCATATCTTC-GGGAGGAACGATGAGACCAATGGTTCCCTTTTGCGC 364542 | ||| || || ||||| ||||| || || | | ||| |||||||||||||||||| | Sbjct 6621 C-GCGAGTGAAAGGCATGTCTTCTTGGCGGTAAG-TGATACCAATGGTTCCCTTTTGACC 6564 Query 364543 ATAGCGAGAAGCAAACTTGTCGCCAAT 364569 | ||||| || ||||| || ||||| Sbjct 6563 GTGACGAGAGGCGAACTTATCACCAAT 6537 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1884720247263840