Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20sp._20VKM_20F-
3808_20[genbank_20GCA_5F000750675.1_202014-09-09] 3,534 sequences; 27,778,879 total letters
Query= AAMG01002244.1
Length=504
Score E
Sequences producing significant alignments: (Bits) Value
seq714 239 1e-60
seq2909 104 7e-20
seq1347 80.6 8e-13
>seq714
Length=32840
Score = 239 bits (264), Expect = 1e-60
Identities = 134/135 (99%), Gaps = 0/135 (0%)
Strand=Plus/Minus
Query 370 GGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATGAGCCATTCGC 429
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 24864 GGTTATCCAAGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATGAGCCATTCGC 24805
Query 430 AGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTTTGAGACAAGCA 489
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 24804 AGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTTTGAGACAAGCA 24745
Query 490 TATGACTACTGGCAG 504
|||||||||||||||
Sbjct 24744 TATGACTACTGGCAG 24730
>seq2909
Length=786
Score = 104 bits (114), Expect = 7e-20
Identities = 57/57 (100%), Gaps = 0/57 (0%)
Strand=Plus/Plus
Query 49 TTGTCACTACCTCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTG 105
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 TTGTCACTACCTCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTG 57
>seq1347
Length=20266
Score = 80.6 bits (88), Expect = 8e-13
Identities = 44/44 (100%), Gaps = 0/44 (0%)
Strand=Plus/Plus
Query 461 CATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504
||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3378 CATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 3421
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1510346622464
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |