Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._20VKM_20F- 3808_20[genbank_20GCA_5F000750675.1_202014-09-09] 3,534 sequences; 27,778,879 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq714 239 1e-60 seq2909 104 7e-20 seq1347 80.6 8e-13 >seq714 Length=32840 Score = 239 bits (264), Expect = 1e-60 Identities = 134/135 (99%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 370 GGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATGAGCCATTCGC 429 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 24864 GGTTATCCAAGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATGAGCCATTCGC 24805 Query 430 AGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTTTGAGACAAGCA 489 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 24804 AGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTTTGAGACAAGCA 24745 Query 490 TATGACTACTGGCAG 504 ||||||||||||||| Sbjct 24744 TATGACTACTGGCAG 24730 >seq2909 Length=786 Score = 104 bits (114), Expect = 7e-20 Identities = 57/57 (100%), Gaps = 0/57 (0%) Strand=Plus/Plus Query 49 TTGTCACTACCTCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTG 105 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1 TTGTCACTACCTCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTG 57 >seq1347 Length=20266 Score = 80.6 bits (88), Expect = 8e-13 Identities = 44/44 (100%), Gaps = 0/44 (0%) Strand=Plus/Plus Query 461 CATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 |||||||||||||||||||||||||||||||||||||||||||| Sbjct 3378 CATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 3421 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510346622464