Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._20VKM_20F- 3808_20[genbank_20GCA_5F000750675.1_202014-09-09] 3,534 sequences; 27,778,879 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq1566 277 1e-69 seq2445 179 3e-40 seq2493 129 5e-25 >seq1566 Length=8448 Score = 277 bits (306), Expect = 1e-69 Identities = 632/942 (67%), Gaps = 8/942 (1%) Strand=Plus/Minus Query 66002 GGAAGGGCAAGAGATGCGAGGTTGCAGACAGCTATCTCGTCAGGAGCGGTATACTCGACA 66061 || |||||||| ||||| | ||| || || || | ||| || ||||| | ||||||||| Sbjct 8333 GGCAGGGCAAGGGATGCCAAGTTACACACGGCAACCTCATCTGGAGCAGAGTACTCGACA 8274 Query 66062 ATTTCGGTGCACAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTGATTACTCTTGCGA 66121 || || |||||||| ||| || ||| ||||| || | |||| || || |||||||| Sbjct 8273 ATCTCCGTGCACAGGTTAGAGCTGCGGATGGTACCAAGGTTCTTCTGGTTGCTCTTGCGG 8214 Query 66122 TTGCATGCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTGGGACTCAATGATG 66181 ||||| ||||||||||||| |||| | || | || |||||| || ||||| | ||| Sbjct 8213 TTGCAAGCATCCTTGTACAACATGAAAGGGTTTCCTGTCTCAGTCTGAGACTCGAGAATG 8154 Query 66182 GCGTGCCAAAGAGCGCGTGCCTTCACCGTACGTACCGCCCTACCTTTGCGT-TCGTAATG 66240 | || |||||| | ||||| | || | | | |||| | | | || ||||| | Sbjct 8153 GAGTACCAAAGCTTCTGGGCCTTGATAGT-CTTGCGACCCTTCTTCTCCGACTCGTATTT 8095 Query 66241 TTCGTAGAGGTGTTCGAAGGATTCACCCCATACTTCGGACAGACATGGACACTTGTGTGG 66300 |||||||| ||||| ||||| | || || | || | || || | || || Sbjct 8094 CTCGTAGAGAGCCTCGAACTCATCACCGTAAACGTCCGCCAATCCAGGGCATTCGTTGGG 8035 Query 66301 ACACATCAGCGACCAATCACCATCCTGTTCTACACGACGCATAAATAGATCAGGTATCCA 66360 ||||| || | ||| ||||| | || || ||||| ||| || ||||| || ||||| Sbjct 8034 GCACATGAGAGTCCAGTCACCGTTCTTCTCAACACGCTTCATGAAGAGATCCGGGATCCA 7975 Query 66361 GAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAATGCCGTGATTTTTGCGCAAGTC 66420 ||| |||||||| | || || || || ||||| ||||||| || || | |||||| Sbjct 7974 GAGAGCGTAGAACAAGTCACGGGCACGGACTTCCTCCTTGCCGTGGTTCTTCCTCAAGTC 7915 Query 66421 GAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCATACG 66480 | |||||| |||| || || |||||||| || | |||||||||||| | || || Sbjct 7914 CAAGAACTCGAAGACATCAGCGTGCCATGGCTCAACGTAGATGGCGAAGGCACCAGGGCG 7855 Query 66481 TTTGCCGCCACCTTGGTCGACGTAGCGAGCGACATTGTTGAAGACACGCAACATCGGTAC 66540 ||| |||||| ||||| ||||| | || ||||||||||| || | ||| || || Sbjct 7854 CTTGTTGCCACCCTGGTCAACGTATCTGGCAGTGTTGTTGAAGACGCGGAGCATGGGAAC 7795 Query 66541 GAGCCCGTTAGATTTGCCATTGGTGCCGTCGATGGGGGATCCTCGTGCCCGTATATCGTG 66600 || ||||| || || || ||||| ||| | ||| | || || || ||| || Sbjct 7794 GATACCGTTCGAGTTTCCGTTGGTACCGGCAATGTATGCACCGGTGGCACGGATACGATG 7735 Query 66601 AACATTCAGACCAATACCACCGGCCGTCTTCGAGATGGCAGCACAATCGGCCACTGTCCG 66660 | |||| || ||||| ||||| ||||| ||||| ||||| | ||| Sbjct 7734 GATGTTCAATCCGATACCTCCGGCAGTCTTTGAGATCATGGCACATGTCTTGAGTGTGTC 7675 Query 66661 GAATATGCCGTCAATGGAGTCACCCTTGATGGTCAGGAGGTAGCATGAACTAAGTTGGGG 66720 | || || ||||| || |||| ||| | | | |||| || || || | Sbjct 7674 ATAGATACCCTCAATACTATCCTCCTTCATGTCGACCAAGAAGCAGGATGACAGCTGAGC 7615 Query 66721 TTTGGGTGTGGCGGCCGAGAAGAGGGTGGGTGTAGCGTGCGTAAAGTAATGGCGAGACAT 66780 | ||||| | || |||||| || || | ||||| || ||||| | | |||||| Sbjct 7614 CTGTGGTGTACCAGCATTGAAGAGTGTTGGGGAGGCGTGTGTGAAGTATTTGGAAGACAT 7555 Query 66781 GTAATTGTACGTCTCGATGACAGCATCAATGTTTTCGCCATGAATCCCGAGTG-CACATC 66839 | ||||| ||||| ||| | ||||| | ||||| ||||| || | | |||| | Sbjct 7554 GAGGTTGTATGTCTCAATGGCCTTCTCAATATCCTCGCCGTGAATGCCAACCGCCACA-C 7496 Query 66840 GCATCAGGAGGTATTGAGGCCGTTCGACCAGCCGATCCTTGATATGC--ATTAAGTAGGA 66897 |||| | | || || |||| ||| | || | || | | | || | | ||| || Sbjct 7495 GCATAATCATGTGCTGTGGCCTTTC-AGCAACGTTGCCATCA-AGGCGGAGAAGGTATGA 7438 Query 66898 GCGTTCCAGGGTCTTGATACCAAAGTACGAGTAATTGAAATC 66939 || || |||||||||| ||||| || ||| |||||||| Sbjct 7437 ACGCTCAAGGGTCTTGAAGCCAAAATATTGGTAGTTGAAATC 7396 >seq2445 Length=7783 Score = 179 bits (198), Expect = 3e-40 Identities = 561/855 (66%), Gaps = 18/855 (2%) Strand=Plus/Plus Query 61087 ATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTG 61146 || |||| |||||||| ||||||||||| || |||||||| | |||||| | || | Sbjct 8 ATCTGGCAGATGTACAAGAAGGCGGAAGCGTCTTTCTGGACTGCAGAGGAGATTGACCTC 67 Query 61147 TCCAAAGACATGAATGACTGG---GAGCGT-TTATCGAGCGGTGAACAACATTTCATTAA 61202 ||||| ||| | | |||||| | ||| | | || || ||| | | ||||| Sbjct 68 TCCAAGGACCTTCACGACTGGAACAACCGTCTCAATGA-CGATGAGCGCTACTTCATCTC 126 Query 61203 ACATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACG 61262 || || | || ||||| ||||| || ||||| || ||||| ||||| | | || || Sbjct 127 CCACGTTCTCGCTTTCTTCGCCGCGTCTGACGGAATTGTCAACGAGAACCTTCTCGAGCG 186 Query 61263 TTTCGCGCAG-GAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCA 61321 ||| |||| ||||| ||| | | ||||| || || |||||||| ||||| || | Sbjct 187 CTTC-AGCAGTGAGGTCCAAATCCCAGAGGCTCGCTGCTTCTACGGTTTCCAAATCATGA 245 Query 61322 TGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCGGG 61381 | ||||| | ||| | |||| ||| | |||||||| || ||||||| ||||| || Sbjct 246 TCGAGAACATTCACGCCGAGACATACTCCCTCCTCATCGACACATACATCAAGGAGCAGG 305 Query 61382 CGGAACGTGAACGATTGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAAGCGG 61441 | | || | | ||||||||||||||||| || || | ||| ||| || | Sbjct 306 CCCAGCGCACATACCTCTTCAATGCCATCGAGACCATCCCTTGCATCAAGAAGAAGGCCG 365 Query 61442 ATTGGGCCTTCAATTGGATCACCAGTACAACG--GCTACATTTGGTGAACGATTGCTGGC 61499 | ||||| ||| ||||| ||| |||| | | || |||| | || || | || Sbjct 366 ACTGGGCTGTCAGGTGGAT--CCAAGACAAGGATTCCACCTTTGCCCAGCGCCTGGTTGC 423 Query 61500 ATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAA 61559 || || | || |||||| | || ||| || ||||| ||| | || || ||| | || Sbjct 424 CTTCGCTGCCGTTGAGGGTATCTTCTTCTCCGGCTCGTTCGCCTCTATTTTCTGGCTCAA 483 Query 61560 GAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAGGG 61619 ||| ||||| || ||| | || ||||| ||| ||| ||| | || || ||||| ||||| Sbjct 484 GAAGCGTGGTCTCATGGCTGGCCTGACTTTCTCCAACGAGCTCATCTCCCGCGATGAGGG 543 Query 61620 CATGCATTGTGATTTTGCTGTTTTGCTATTCAAACGCTATCTGGTGAATCGTCCGTCGGA 61679 | || ||| || || | || ||| | | || | || || | Sbjct 544 TCTCCACACTGACTTCGCCTGCCTCCTCTTC---TCCCACCTTAGACACCGCCCAAGCAA 600 Query 61680 GGAGCGTGTGGGTGAGATTGTTCGTGAGGCGGTAACTATCGAACAGGAATTTCTGACTGA 61739 | || ||| || | | ||||| || | ||||| || || || |||| || Sbjct 601 GCAGGCTGTCCAGGATGTCATCACCGAGGCTGTCGCGATCGAGCAAGAGTTCTTGACAGA 660 Query 61740 CGCTTTGCCCGTCT-CACTCATCGGCATGAATTGTGGAC-TAATGTCGCAGTATATTGAA 61797 || | ||| | | | || |||||||||| | || | ||| ||| || || ||| Sbjct 661 GGCACT-CCCATGTGCGCTGCTCGGCATGAA-CGCCAACTTGATGAAGCAATACATCGAA 718 Query 61798 TTTGTTGCCGACCGTCTGTTGGTCGATTTGGGTATGAAGCGGATCTATAATACGAAAAAC 61857 || || |||||| | ||| || | | |||| || | |||| || | | ||| Sbjct 719 TTCGTCGCCGACAGGCTGCTGCTTTCCCTCGGTAACGAGAAGTTCTACAAGTCTACCAAC 778 Query 61858 CCATTTGATTTCATGGACATGATTTCGCTGGATGGCAAGACGAATTTTTTCGAGAAACGT 61917 || ||||| |||||||| | || || |||| || ||||| || || |||||||| ||| Sbjct 779 CCCTTTGACTTCATGGAGAACATCTCCCTGGCAGGAAAGACCAACTTCTTCGAGAAGCGT 838 Query 61918 GTAGGCGACTATCAA 61932 || | |||||| ||| Sbjct 839 GTCGCCGACTACCAA 853 >seq2493 Length=2855 Score = 129 bits (142), Expect = 5e-25 Identities = 334/497 (67%), Gaps = 18/497 (4%) Strand=Plus/Minus Query 65077 ATCGACCGTGAACTGGATCGCATTAGCAGCCGCCTTGGTCCTAAGATAGTACATGCCGGT 65136 |||||| ||||||||||| | | | || ||| |||| | ||||||||||||||||| Sbjct 840 ATCGACGGTGAACTGGATAGGAGCCGAGGCGGCCATGGTACGGAGATAGTACATGCCGGT 781 Query 65137 CTTGAGGCC-AGCACGCCAAGCATAGAAATGCATCGATGATAATTTTGCATAAT-TCGGC 65194 ||||||||| ||| ||| || || ||||| || | | || |||| | | | || Sbjct 780 CTTGAGGCCGAGC-TTCCAGCCAGCAAAGTGCATGGA-GGTGATCTTGCCCATTGTTGGG 723 Query 65195 TCGGCCACATGCATATTCAACGACTGACTCTGATCGATGTAACGACCACGATCTGCAGCC 65254 || || || || || | ||||| |||||||||| | ||||||||| || ||| Sbjct 722 TCCTTCATGTGGATGTTGAGGGACTGGGACTGATCGATGAAGGCACCACGATCAGCGGCC 663 Query 65255 ATGTCAATGATACGACGTCCCGATATCTCCCAGACGGTCTTGTACAG-GCGACGTACCTC 65313 || | | ||| || || ||||||||||| |||||||| || || | | || Sbjct 662 ATCTGGACGATGGTGCGCTGAGAGATCTCCCAGACAGTCTTGTAGAGAGCCTTG-ATGTC 604 Query 65314 AATTGGAATCTCCTCAATGTCCTGGACTGAACCACGACGT--GCAATAATGCGATTACGC 65371 ||| || | ||||| |||| || || | ||| || || ||||| || | Sbjct 603 GGCTGGGATGTTGGGAATGTTTTGGATGGATCCTC--CGTCCGCGATGATGCGGTTCTTC 546 Query 65372 ATCGACTCTGACCACAAACCCAAATCGA-TAAGATGTTG---AACCAAGTGACGATTGAT 65427 || || ||||||| |||| |||| ||| ||| ||||||| |||||| Sbjct 545 ATGTTGTCAGACCACAGTCCCATGTCGACCAAGTCCTTGAGCAACCAAG----GATTGAC 490 Query 65428 GACTTGGAACTCGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGGGTTCAAA 65487 || ||||||||||| | ||| ||||| || |||||||| || ||| || || || Sbjct 489 AACCTGGAACTCGCCAGCCAGGACACGGCGCGAGTAGATGTTCGAGGTGTATGGCTCGAA 430 Query 65488 GGATTCAGTGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGACCAACAA 65547 | | || || ||| ||||| |||| || || ||||| |||||||| || || | | Sbjct 429 GCACTCGTTGAAGCCGAGAATCTGGGAGGTGGAAGCAGTGGGCATGGGTGCAACGAGAAG 370 Query 65548 TGAGTTTCGCAATCCGT 65564 ||||| || | |||| Sbjct 369 GGAGTTGCGGACACCGT 353 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397550876497760