Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._20VKM_20F- 3808_20[genbank_20GCA_5F000750675.1_202014-09-09] 3,534 sequences; 27,778,879 total letters Query= NC_032108.1 Length=589068 Score E Sequences producing significant alignments: (Bits) Value seq9 122 3e-22 >seq9 Length=21203 Score = 122 bits (134), Expect = 3e-22 Identities = 116/146 (79%), Gaps = 2/146 (1%) Strand=Plus/Minus Query 364425 CAATAGTCATACGAGAGGGAATGGAGAGAGGGTTGATGATGATGTCAGGCACCATGCCGT 364484 |||| ||||||||||| ||||||| | | ||||||||||||| ||||||||| || || | Sbjct 6937 CAATCGTCATACGAGAAGGAATGGCGTGGGGGTTGATGATGAGGTCAGGCACAATACCCT 6878 Query 364485 CAGCGGTAAAGGGCATATCTTCG-GGAGGAACGATGAGACCAATGGTTCCCTTTTGCGCA 364543 | ||| || |||||||| || || || | | ||| ||||||||||||||| || | Sbjct 6877 CGCGGGTGAATGGCATATCCTCTTGGCGGTAGG-TGATACCAATGGTTCCCTTCTGTCCG 6819 Query 364544 TAGCGAGAAGCAAACTTGTCGCCAAT 364569 | ||||||||| ||||| || ||||| Sbjct 6818 TGGCGAGAAGCGAACTTATCACCAAT 6793 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1884801053521862