Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._20VKM_20F- 4246_20[genbank_20GCA_5F000750735.1_202014-09-09] 3,685 sequences; 25,759,859 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq3588 500 1e-139 seq1177 82.4 1e-13 >seq3588 Length=3834 Score = 500 bits (554), Expect = 1e-139 Identities = 282/285 (99%), Gaps = 0/285 (0%) Strand=Plus/Minus Query 11 AATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTA 70 ||||||||||| | |||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 3431 AATTACCATTGCGACGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTA 3372 Query 71 AACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTC 130 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 3371 AACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTC 3312 Query 131 GGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGG 190 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 3311 GGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGG 3252 Query 191 CTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGA 250 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 3251 CTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGA 3192 Query 251 GGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 295 ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 3191 GGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 3147 >seq1177 Length=29134 Score = 82.4 bits (90), Expect = 1e-13 Identities = 48/50 (96%), Gaps = 0/50 (0%) Strand=Plus/Minus Query 150 ACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAA 199 |||||||||| ||||||||||||||||||||||||||||||| ||||||| Sbjct 1142 ACATCGAAGGCTCAAAAAGCAACGTCGCTATGAACGCTTGGCCGCCACAA 1093 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 854368515360