Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._20VKM_20F- 4246_20[genbank_20GCA_5F000750735.1_202014-09-09] 3,685 sequences; 25,759,859 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq3534 486 4e-135 seq422 113 9e-23 >seq3534 Length=2743 Score = 486 bits (538), Expect = 4e-135 Identities = 293/309 (95%), Gaps = 0/309 (0%) Strand=Plus/Plus Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAG 79 || ||||||||||||||||||||||||| ||| |||||||| |||||| |||||||||| Sbjct 2181 GAACGAGACCTTAACCTGCTAAATAGCCCGGCTAGCTTTGGCTGGTCGCTGGCTTCTTAG 2240 Query 80 AGGGACTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTA 139 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2241 AGGGACTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTA 2300 Query 140 GATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCCG 199 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2301 GATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCCG 2360 Query 200 GAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTG 259 |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2361 AAAGGCCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTG 2420 Query 260 CTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTG 319 |||||||||||||||| ||||||| ||||| ||||||||| || | || |||||||||| Sbjct 2421 CTCTTCAACGAGGAATTCCTAGTAGGCGCGAGTCATCAGCTCGTGCCGACTACGTCCCTG 2480 Query 320 CCCTTTGTA 328 ||||||||| Sbjct 2481 CCCTTTGTA 2489 >seq422 Length=16548 Score = 113 bits (124), Expect = 9e-23 Identities = 89/107 (83%), Gaps = 6/107 (6%) Strand=Plus/Minus Query 145 TCTGGGCCGCACGCGCGC------TACACTGACAGAGCCAACGAGTTCATCACCTTGGCC 198 |||||||| ||||||||| ||| | |||||||||||||||| ||||||||||||| Sbjct 8902 TCTGGGCCACACGCGCGCGCGTGGTACGCCGACAGAGCCAACGAGTCCATCACCTTGGCC 8843 Query 199 GGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAG 245 | |||| |||||||||||||| ||||||||||||||| | | ||| Sbjct 8842 GAAAGGCGTGGGTAATCTTGTTGCACTCTGTCGTGCTGGAGGTGGAG 8796 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 947165095680