Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20sp._20VKM_20F-
4246_20[genbank_20GCA_5F000750735.1_202014-09-09] 3,685 sequences; 25,759,859 total letters
Query= AAMG01002186.1
Length=328
Score E
Sequences producing significant alignments: (Bits) Value
seq3534 486 4e-135
seq422 113 9e-23
>seq3534
Length=2743
Score = 486 bits (538), Expect = 4e-135
Identities = 293/309 (95%), Gaps = 0/309 (0%)
Strand=Plus/Plus
Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAG 79
|| ||||||||||||||||||||||||| ||| |||||||| |||||| ||||||||||
Sbjct 2181 GAACGAGACCTTAACCTGCTAAATAGCCCGGCTAGCTTTGGCTGGTCGCTGGCTTCTTAG 2240
Query 80 AGGGACTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTA 139
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2241 AGGGACTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTA 2300
Query 140 GATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCCG 199
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2301 GATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCCG 2360
Query 200 GAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTG 259
|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2361 AAAGGCCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTG 2420
Query 260 CTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTG 319
|||||||||||||||| ||||||| ||||| ||||||||| || | || ||||||||||
Sbjct 2421 CTCTTCAACGAGGAATTCCTAGTAGGCGCGAGTCATCAGCTCGTGCCGACTACGTCCCTG 2480
Query 320 CCCTTTGTA 328
|||||||||
Sbjct 2481 CCCTTTGTA 2489
>seq422
Length=16548
Score = 113 bits (124), Expect = 9e-23
Identities = 89/107 (83%), Gaps = 6/107 (6%)
Strand=Plus/Minus
Query 145 TCTGGGCCGCACGCGCGC------TACACTGACAGAGCCAACGAGTTCATCACCTTGGCC 198
|||||||| ||||||||| ||| | |||||||||||||||| |||||||||||||
Sbjct 8902 TCTGGGCCACACGCGCGCGCGTGGTACGCCGACAGAGCCAACGAGTCCATCACCTTGGCC 8843
Query 199 GGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAG 245
| |||| |||||||||||||| ||||||||||||||| | | |||
Sbjct 8842 GAAAGGCGTGGGTAATCTTGTTGCACTCTGTCGTGCTGGAGGTGGAG 8796
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 947165095680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |