Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._20VKM_20F- 4246_20[genbank_20GCA_5F000750735.1_202014-09-09] 3,685 sequences; 25,759,859 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq3654 289 2e-73 seq512 194 1e-44 >seq3654 Length=7047 Score = 289 bits (320), Expect = 2e-73 Identities = 635/943 (67%), Gaps = 10/943 (1%) Strand=Plus/Minus Query 66002 GGAAGGGCAAGAGATGCGAGGTTGCAGACAGCTATCTCGTCAGGAGCGGTATACTCGACA 66061 || |||||||| ||||| | |||||| || || | ||| || || || | ||||||||| Sbjct 3995 GGCAGGGCAAGGGATGCCAAGTTGCACACGGCAACCTCATCTGGGGCAGAGTACTCGACA 3936 Query 66062 ATTTCGGTGCACAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTGATTACTCTTGCGA 66121 || || ||||| || || || ||| ||||| || | |||| || || |||||||| Sbjct 3935 ATCTCTGTGCAAAGGTTGGAGCTGCGGATGGTACCGAGGTTCTTCTGGTTGCTCTTGCGG 3876 Query 66122 TTGCATGCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTGGGACTCAATGATG 66181 ||||| ||||||||||||| |||| | || | || |||||| || ||||| | ||| Sbjct 3875 TTGCAGGCATCCTTGTACAGCATGAAAGGGTTTCCTGTCTCAGTCTGAGACTCGAGAATG 3816 Query 66182 GCGTGCCAAAGAGCGCGTGCCTTCACCGTACGTACCGCCCTACCTTTGCGT-TCGTAATG 66240 | || |||||| | ||||| | || | | | |||| | | | | ||||| Sbjct 3815 GAGTACCAAAGCTTCTGGGCCTTGATGGT-CTTGCGACCCTTACCCTCCTTCTCGTAGCT 3757 Query 66241 TTCGTAGAGGTGTTCGAAGGATTCACCCCATACTTCGGACAGACATGGACACTTGTGTGG 66300 |||||||| || || || || | || || | || || || || | || || Sbjct 3756 CTCGTAGAGCGCCTCAAACTCATCGCCGTAGACGTCCGCCAAACCAGGGCATTCGTTGGG 3697 Query 66301 ACACATCAGCGACCAATCACCATCCTGTTCTACACGACGCATAAATAGATCAGGTATCCA 66360 ||||| || | ||| || || | || || ||||| ||| || |||||||| ||||| Sbjct 3696 GCACATGAGAGTCCAGTCGCCGTTCTTCTCGACACGCTTCATGAAGAGATCAGGGATCCA 3637 Query 66361 GAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAATGCCGTGATTTTTGCGCAAGTC 66420 ||| |||||||| | || || || || ||||| | ||||| || || | |||||| Sbjct 3636 GAGAGCGTAGAACAAGTCACGGGCACGGACTTCCTCCTTTCCGTGGTTCTTTCTCAAGTC 3577 Query 66421 GAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCATACG 66480 ||||||||||||| || || |||||||| || | |||||||||||| | ||| ||| Sbjct 3576 CAGGAACTCAAAGACATCCGCGTGCCATGGCTCGACGTAGATGGCGAAAGCGCCAGGACG 3517 Query 66481 TTTGCCGCCACCTTGGTCGACGTAGCGAGCGACATTGTTGAAGACACGCAACATCGGTAC 66540 ||| |||||| ||||| ||||| | || |||||||||||||| | ||| || || Sbjct 3516 CTTGTTGCCACCCTGGTCAACGTATCTTGCAGTGTTGTTGAAGACACGGAGCATAGGGAC 3457 Query 66541 GAGCCCGTTAGATTTGCCATTGGTGCCGTCGATGGGGGATCCTCGTGCCCGTATATCGTG 66600 || ||||| || || || ||||| ||| | ||| | || || || ||| ||| Sbjct 3456 GATACCGTTCGAGTTTCCGTTGGTACCGGCAATGTATGCACCAGTGGCACGGATACGGTG 3397 Query 66601 AACATTCAGACCAATACCACCGGCCGTCTTCGAGATGGCAGCACAATCGGC--CACTGTC 66658 || |||| || || || || || ||||| ||||| ||||| || | | ||| Sbjct 3396 AATGTTCAATCCGATGCCTCCAGCAGTCTTTGAGATCATGGCACA--CGTCTTGAGTGTG 3339 Query 66659 CGGAATATGCCGTCAATGGAGTCACCCTTGATGGTCAGGAGGTAGCATGAACTAAGTTGG 66718 | || || ||||| || |||| ||| | | | |||| || || ||| Sbjct 3338 TCATAGATACCCTCAATACTATCCTCCTTCATGTCGACCAAGAAGCAGGATGACAGCTGG 3279 Query 66719 GGTTTGGGTGTGGCGGCCGAGAAGAGGGTGGGTGTAGCGTGCGTAAAGTAATGGCGAGAC 66778 | | ||||| | || |||||| || || | |||||| || || || | | |||| Sbjct 3278 GCCTGTGGTGTACCAGCATTGAAGAGTGTTGGGGAAGCGTGTGTGAAATATTTGGAAGAC 3219 Query 66779 ATGTAATTGTACGTCTCGATGACAGCATCAATGTTTTCGCCATGAATCCCGAGTGCACAT 66838 ||| ||||| ||||||||| ||||| | ||||| ||||| || | ||| Sbjct 3218 ATGAGGTTGTATGTCTCGATGGTCTTCTCAATATCCTCGCCGTGAATGCCAACGGCAACA 3159 Query 66839 CGCATCAGGAGGTATTGAGGCCGTTCGACCAGCCGATCCTTGATATGC--ATTAAGTAGG 66896 ||||| | | || || |||| || | || || || | | | || | | ||||| Sbjct 3158 CGCATAATCATGTGCTGCGGCCTCTC-AGCAACCTTGCCATCA-AGGCGGAGAAGGTAGG 3101 Query 66897 AGCGTTCCAGGGTCTTGATACCAAAGTACGAGTAATTGAAATC 66939 | || || |||||||||| |||||||| ||| |||||||| Sbjct 3100 ACCGCTCAAGGGTCTTGAAGCCAAAGTATTGGTAGTTGAAATC 3058 Score = 116 bits (128), Expect = 3e-21 Identities = 329/496 (66%), Gaps = 16/496 (3%) Strand=Plus/Minus Query 65077 ATCGACCGTGAACTGGATCGCATTAGCAGCCGCCTTGGTCCTAAGATAGTACATGCCGGT 65136 |||||| ||||| ||||| | | || ||| |||| | || |||||||||||||| Sbjct 4902 ATCGACGGTGAATTGGATAGGTGCCGAGGCGGCCATGGTACGGAGGTAGTACATGCCGGT 4843 Query 65137 CTTGAGGCCAGCACGCCAAGCATAGAAATGCATCGATGATAATTTTGCATAAT-TCGGCT 65195 |||||||||| |||| || || ||||| |||| | || |||| | | | || | Sbjct 4842 CTTGAGGCCAAGCTTCCAACCAGCAAAGTGCATGGATG-TGATCTTGCCCATTGTTGGGT 4784 Query 65196 CGGCCACATGCATATTCAACGACTGACTCTGATCGATGTAACGACCACGATCTGCAGCCA 65255 | || || || || | ||||| |||||| ||| | ||||| || ||||||| Sbjct 4783 CCTTCATGTGGATGTTGAGGGACTGGGACTGATCAATGAAGGCTCCACGGTCAGCAGCCA 4724 Query 65256 TGTCAATGATACGACGTCCCGATATCTCCCAGACGGTCTTGTACAGGCGACGT-ACCTCA 65314 | | | ||| ||| || |||||||||||||||||||| ||| | | | | || Sbjct 4723 TCTGGACGATGGTACGCTGGGAGATCTCCCAGACGGTCTTGTAGAGG-GCCTTGATGTCG 4665 Query 65315 ATTGGAATCTCCTCAATGTCCTGGACTGAACCACGACGT--GCAATAATGCGATTACGCA 65372 || || | |||| ||||| || |||| ||| || || || || || || Sbjct 4664 GCAGGGATGTTGGGGATGTTCTGGATGGAGCCAC--CGTCCGCGATGATACGGTTCTTCA 4607 Query 65373 TCGACTCTGACCACAAACCCAAATCGA-TAAGATGTTG---AACCAAGTGACGATTGATG 65428 | || ||||||| ||||| |||| ||| ||| ||||| | | |||| Sbjct 4606 TGTTGTCAGACCACAGACCCATGTCGACCAAGTCCTTGAGCAACCAGG----GGTTGACT 4551 Query 65429 ACTTGGAACTCGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGGGTTCAAAG 65488 |||||||||||||| | ||| ||||| || || ||||| || ||| || || || Sbjct 4550 ACTTGGAACTCGCCAGCCAGGACACGGCGCGAGTAAATGTTCGAGGTGTATGGCTCGAAA 4491 Query 65489 GATTCAGTGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGACCAACAAT 65548 | || || ||| ||||| |||| || || ||||| ||||| ||||| || | | Sbjct 4490 CACTCGTTGAAGCCGAGAATCTGGGAGGTGGAAGCAGTGGGCATAGGAGCAACGAGGAGA 4431 Query 65549 GAGTTTCGCAATCCGT 65564 ||||| || | |||| Sbjct 4430 GAGTTGCGGACACCGT 4415 >seq512 Length=30657 Score = 194 bits (214), Expect = 1e-44 Identities = 562/854 (66%), Gaps = 16/854 (2%) Strand=Plus/Plus Query 61087 ATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTG 61146 || |||| |||||||| ||||| || || || |||||||| | |||||| | ||| | Sbjct 17448 ATCTGGCAGATGTACAAGAAGGCCGAGGCATCTTTCTGGACCGCAGAGGAGATTGATCTC 17507 Query 61147 TCCAAAGACATGAATGACTGGGAG---CGTTT-ATCGAGCGGTGAACAACATTTCATTAA 61202 ||||| ||| | | |||||| | ||| | | ||| || ||| | | ||||| Sbjct 17508 TCCAAGGACCTTCACGACTGGAACAACCGTCTCAACGA-CGATGAGCGCTACTTCATCTC 17566 Query 61203 ACATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACG 61262 || || | || ||||| ||||| || ||||| || ||||| ||||| | | || || Sbjct 17567 CCACGTTCTCGCTTTCTTCGCCGCCTCTGACGGAATTGTCAACGAGAACCTCCTCGAGCG 17626 Query 61263 TTTCGCGCAG-GAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCA 61321 ||| |||| ||||| ||| | | ||||| || || |||||||| ||||| || | Sbjct 17627 CTTCA-GCAGTGAGGTCCAAATCCCAGAGGCCCGCTGCTTCTACGGTTTCCAAATCATGA 17685 Query 61322 TGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCGGG 61381 | ||||| | ||| | |||| ||| | |||||||| || ||||||| ||||| || Sbjct 17686 TCGAGAACATTCACGCCGAGACATACTCCCTCCTCATCGACACATACATCAAGGAGCAGG 17745 Query 61382 CGGAACGTGAACGATTGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAAGCGG 61441 | |||| | | ||||||||||||||||| || || | ||| ||| || | Sbjct 17746 CTCAACGCACATACCTCTTCAATGCCATCGAGACTATTCCTTGCATTAAGAAGAAGGCTG 17805 Query 61442 ATTGGGCCTTCAATTGGATCACCAGTACAACG--GCTACATTTGGTGAACGATTGCTGGC 61499 | ||||| ||| ||||| ||| |||| | |||| |||| | || | | || Sbjct 17806 ACTGGGCTGTCAGGTGGAT--CCAAGACAAGGATTCTACCTTTGCCCAGCGTCTCGTTGC 17863 Query 61500 ATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAA 61559 ||||| | ||||||||| | || ||| || || || || | || || ||| | || Sbjct 17864 CTTTGCCGCCGTCGAGGGTATCTTCTTCTCCGGCTCCTTCGCATCCATTTTCTGGCTCAA 17923 Query 61560 GAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAGGG 61619 ||| ||||| || ||| | || ||||||||| || ||| | || || || |||||||| Sbjct 17924 GAAGCGTGGCCTCATGGCTGGCCTGACCTTCTCGAACGAGCTCATCTCCCGTGACGAGGG 17983 Query 61620 CATGCATTGTGATTTTGCTGTTTTGCTATTCAAACGCTATCTGGTGAATCGTCCGTCGGA 61679 | || ||| || || | || ||| | | || | | || || | Sbjct 17984 TCTCCACACTGACTTCGCCTGCCTCCTCTTC---TCCCACCTCAAGCACCGCCCAAGCAA 18040 Query 61680 GGAGCGTGTGGGTGAGATTGTTCGTGAGGCGGTAACTATCGAACAGGAATTTCTGACTGA 61739 | || || || | || || || || || ||||| ||||| || ||||||| Sbjct 18041 GAAGGCCGTCCAAGACGTCATTACCGAAGCCGTCACCATCGAGCAGGAGTTCTTGACTGA 18100 Query 61740 CGCTTTGCCCGTCTCACTCATCGGCATGAATTGTGGAC-TAATGTCGCAGTATATTGAAT 61798 || | ||| | || |||||||||| | || | ||| ||| || ||||| | Sbjct 18101 GGCACTTCCCTGTGCTCTGCTCGGCATGAA-CGCCAACTTGATGAAGCAATACATTGAGT 18159 Query 61799 TTGTTGCCGACCGTCTGTTGGTCGATTTGGGTATGAAGCGGATCTATAATACGAAAAACC 61858 | || ||||| | ||| || | | | || | || | ||| || ||| |||| Sbjct 18160 TCGTCGCCGATAGACTGCTGCTTTCTCTCGGAAACGAGAAGTACTACAAGTCGACCAACC 18219 Query 61859 CATTTGATTTCATGGACATGATTTCGCTGGATGGCAAGACGAATTTTTTCGAGAAACGTG 61918 |||| || |||||||| | || || |||| |||||||| || || |||||||| || | Sbjct 18220 CATTCGACTTCATGGAGAACATCTCCCTGGCGGGCAAGACCAACTTCTTCGAGAAGCGCG 18279 Query 61919 TAGGCGACTATCAA 61932 | | |||||| ||| Sbjct 18280 TCGCCGACTACCAA 18293 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397550144848400