Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._20VKM_20F- 4246_20[genbank_20GCA_5F000750735.1_202014-09-09] 3,685 sequences; 25,759,859 total letters Query= NC_032108.1 Length=589068 Score E Sequences producing significant alignments: (Bits) Value seq1166 116 1e-20 >seq1166 Length=8473 Score = 116 bits (128), Expect = 1e-20 Identities = 115/146 (79%), Gaps = 2/146 (1%) Strand=Plus/Plus Query 364425 CAATAGTCATACGAGAGGGAATGGAGAGAGGGTTGATGATGATGTCAGGCACCATGCCGT 364484 |||| ||||||||||| ||||||| | | ||||||||||| | |||||||| || || | Sbjct 6671 CAATTGTCATACGAGAAGGAATGGCGTGGGGGTTGATGATAAGATCAGGCACAATACCCT 6730 Query 364485 CAGCGGTAAAGGGCATATCTTC-GGGAGGAACGATGAGACCAATGGTTCCCTTTTGCGCA 364543 || || || ||||||||||| || || | | ||| |||||||||||| ||||| | Sbjct 6731 CACGAGTGAAAGGCATATCTTCTTGGCGGTAAG-TGATACCAATGGTTCCTTTTTGACCG 6789 Query 364544 TAGCGAGAAGCAAACTTGTCGCCAAT 364569 | ||||||||| ||||| || ||||| Sbjct 6790 TGGCGAGAAGCGAACTTATCACCAAT 6815 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1884797406855705