Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudomassariella_20vexata_20[genbank_20GCA_5F002105095.1_202017-04-
20] 37 sequences; 44,711,451 total letters
Query= AAMG01002236.1
Length=287
Score E
Sequences producing significant alignments: (Bits) Value
seq31 228 1e-57
seq9 228 1e-57
>seq31
Length=3387
Score = 228 bits (252), Expect = 1e-57
Identities = 167/190 (88%), Gaps = 3/190 (2%)
Strand=Plus/Minus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
||||||||||||| || || |||||| ||||||||||||||||||||| |||| ||||||
Sbjct 264 GTACGAGAGGAACTGCTGA-TTCAGA-TAATTGGTTTTTGCGGCTGTCCGACCGGGCAGT 207
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120
||||||| ||||||||||||||||| || ||||||||||||||||| |||||||||||||
Sbjct 206 GCCGCGACGCTACCATCTGCTGGATAATAGCTGAACGCCTCTAAGTTAGAATCCATGCCA 147
Query 121 GAACGGGGTGATTCTCTCCTGCACATCGTAGTCGGATACGAATAGGCTTCGGCCCCGAAC 180
||||| |||||| | |||| ||| | |||| |||||||||||||||| ||||| || |
Sbjct 146 GAACGCGGTGATAC-CTCCCACACGTTGTAGACGGATACGAATAGGCTCCGGCCTCGCAT 88
Query 181 CTTAGCAGGC 190
|||||| |||
Sbjct 87 CTTAGCTGGC 78
>seq9
Length=826202
Score = 228 bits (252), Expect = 1e-57
Identities = 167/190 (88%), Gaps = 3/190 (2%)
Strand=Plus/Minus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
||||||||||||| || || |||||| ||||||||||||||||||||| |||| ||||||
Sbjct 825684 GTACGAGAGGAACTGCTGA-TTCAGA-TAATTGGTTTTTGCGGCTGTCCGACCGGGCAGT 825627
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120
||||||| ||||||||||||||||| || ||||||||||||||||| |||||||||||||
Sbjct 825626 GCCGCGACGCTACCATCTGCTGGATAATAGCTGAACGCCTCTAAGTTAGAATCCATGCCA 825567
Query 121 GAACGGGGTGATTCTCTCCTGCACATCGTAGTCGGATACGAATAGGCTTCGGCCCCGAAC 180
||||| |||||| | |||| ||| | |||| |||||||||||||||| ||||| || |
Sbjct 825566 GAACGCGGTGATAC-CTCCCACACGTTGTAGACGGATACGAATAGGCTCCGGCCTCGCAT 825508
Query 181 CTTAGCAGGC 190
|||||| |||
Sbjct 825507 CTTAGCTGGC 825498
Score = 129 bits (142), Expect = 1e-27
Identities = 142/183 (78%), Gaps = 7/183 (4%)
Strand=Plus/Plus
Query 12 ACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGTGCCGCGAAGCT 71
||||| || |||||| ||| ||||| ||| |||||| | | ||||||| ||||| ||
Sbjct 461327 ACCGCTGA-TTCAGA-TAAATGGTTCTTGGCGCTGTCCTAGCGGGCAGTGTCGCGACACT 461384
Query 72 AC---CATCTGCTGGATTATGGCTGAACGCCTC-TAAGTCAGAATCCATGCCAGAACGGG 127
|| |||||||||||| || || |||||||| ||||| |||||||| |||||||||
Sbjct 461385 ACTACCATCTGCTGGATAATAGCCAAACGCCTCTTAAGTTAGAATCCACGCCAGAACGCA 461444
Query 128 GTGATTCTCTCCTGCACATCGTAGTCGGATACGAATAGGCTTCGGCCCCGAACCTTAGCA 187
||||| | |||| ||||| |||| | |||||| ||| |||||||| | | ||||||
Sbjct 461445 GTGATAC-CTCCCACACATTGTAGACCGATACGGGTAGTCTTCGGCCTCACATCTTAGCT 461503
Query 188 GGC 190
|||
Sbjct 461504 GGC 461506
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 819199706368
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |