Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudomassariella_20vexata_20[genbank_20GCA_5F002105095.1_202017-04- 20] 37 sequences; 44,711,451 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq31 228 1e-57 seq9 228 1e-57 >seq31 Length=3387 Score = 228 bits (252), Expect = 1e-57 Identities = 167/190 (88%), Gaps = 3/190 (2%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||| || || |||||| ||||||||||||||||||||| |||| |||||| Sbjct 264 GTACGAGAGGAACTGCTGA-TTCAGA-TAATTGGTTTTTGCGGCTGTCCGACCGGGCAGT 207 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 ||||||| ||||||||||||||||| || ||||||||||||||||| ||||||||||||| Sbjct 206 GCCGCGACGCTACCATCTGCTGGATAATAGCTGAACGCCTCTAAGTTAGAATCCATGCCA 147 Query 121 GAACGGGGTGATTCTCTCCTGCACATCGTAGTCGGATACGAATAGGCTTCGGCCCCGAAC 180 ||||| |||||| | |||| ||| | |||| |||||||||||||||| ||||| || | Sbjct 146 GAACGCGGTGATAC-CTCCCACACGTTGTAGACGGATACGAATAGGCTCCGGCCTCGCAT 88 Query 181 CTTAGCAGGC 190 |||||| ||| Sbjct 87 CTTAGCTGGC 78 >seq9 Length=826202 Score = 228 bits (252), Expect = 1e-57 Identities = 167/190 (88%), Gaps = 3/190 (2%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||| || || |||||| ||||||||||||||||||||| |||| |||||| Sbjct 825684 GTACGAGAGGAACTGCTGA-TTCAGA-TAATTGGTTTTTGCGGCTGTCCGACCGGGCAGT 825627 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 ||||||| ||||||||||||||||| || ||||||||||||||||| ||||||||||||| Sbjct 825626 GCCGCGACGCTACCATCTGCTGGATAATAGCTGAACGCCTCTAAGTTAGAATCCATGCCA 825567 Query 121 GAACGGGGTGATTCTCTCCTGCACATCGTAGTCGGATACGAATAGGCTTCGGCCCCGAAC 180 ||||| |||||| | |||| ||| | |||| |||||||||||||||| ||||| || | Sbjct 825566 GAACGCGGTGATAC-CTCCCACACGTTGTAGACGGATACGAATAGGCTCCGGCCTCGCAT 825508 Query 181 CTTAGCAGGC 190 |||||| ||| Sbjct 825507 CTTAGCTGGC 825498 Score = 129 bits (142), Expect = 1e-27 Identities = 142/183 (78%), Gaps = 7/183 (4%) Strand=Plus/Plus Query 12 ACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGTGCCGCGAAGCT 71 ||||| || |||||| ||| ||||| ||| |||||| | | ||||||| ||||| || Sbjct 461327 ACCGCTGA-TTCAGA-TAAATGGTTCTTGGCGCTGTCCTAGCGGGCAGTGTCGCGACACT 461384 Query 72 AC---CATCTGCTGGATTATGGCTGAACGCCTC-TAAGTCAGAATCCATGCCAGAACGGG 127 || |||||||||||| || || |||||||| ||||| |||||||| ||||||||| Sbjct 461385 ACTACCATCTGCTGGATAATAGCCAAACGCCTCTTAAGTTAGAATCCACGCCAGAACGCA 461444 Query 128 GTGATTCTCTCCTGCACATCGTAGTCGGATACGAATAGGCTTCGGCCCCGAACCTTAGCA 187 ||||| | |||| ||||| |||| | |||||| ||| |||||||| | | |||||| Sbjct 461445 GTGATAC-CTCCCACACATTGTAGACCGATACGGGTAGTCTTCGGCCTCACATCTTAGCT 461503 Query 188 GGC 190 ||| Sbjct 461504 GGC 461506 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 819199706368