Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pyrenochaeta_20sp._20DS3sAY3a_20[genbank_20GCA_5F001644535.1_202016-
05-18] 69 sequences; 38,501,010 total letters
Query= AAMG01000304.1
Length=683
Score E
Sequences producing significant alignments: (Bits) Value
seq29 462 9e-128
seq2 127 9e-27
>seq29
Length=430389
Score = 462 bits (512), Expect = 9e-128
Identities = 355/418 (85%), Gaps = 2/418 (0%)
Strand=Plus/Plus
Query 243 CCGGTGCACTCTTCTGCGGTCAGGCCAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGG 302
|| |||| ||||||| | |||||||||||||| | ||| ||| ||||||||| | |
Sbjct 230492 CCTGTGCGCTCTTCTATAGGCAGGCCAGCATCAGTTTGGGTGGTTGGATAAAGGTCTATG 230551
Query 303 GAATGTGGCCCCCTTCGGGG-GGTGTTATAGCCCGGGGTGGAATGCGGCCCGCCTGGACT 361
| || | || |||||| || ||||| | | | |||| || |||||||||
Sbjct 230552 TCACGTATCTCCTCTCGGGGAGGCCGTATAGGGCAGAC-GACATGCAACCAGCCTGGACT 230610
Query 362 GAGGTCCGCGCTCCGGCTAGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACA 421
||||||||||| | ||||||||||||||||||||| |||||||||||||||||| |||
Sbjct 230611 GAGGTCCGCGCATCTGCTAGGATGCTGGCGTAATGGCTGTAAGCGGCCCGTCTTGAAACG 230670
Query 422 CGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGA 481
|||||||| ||||||||||| |||||||||||||||||||||| |||| ||||| ||| |
Sbjct 230671 CGGACCAACGAGTCTAACATGTATGCGAGTGTTTGGGTGTCAAGCCCGAGCGCGCAATAA 230730
Query 482 AAGTGAACGGAGGTGGGAACCCGTGAGGGTGCACCATCGACCGATCCTGATGTCTTCGGA 541
|||||||||||||||||| ||| || |||||||||||||||||||||||| ||||| ||
Sbjct 230731 AAGTGAACGGAGGTGGGATCCCTTGCGGGTGCACCATCGACCGATCCTGAGGTCTTTGGG 230790
Query 542 TGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAG 601
||||||||||||||||||| |||||||||||||| |||||||||| |||||| || |||
Sbjct 230791 TGGATTTGAGTAAGAGCATGGCTGTTGGGACCCGGAAGATGGTGAGCTATGCTAGACTAG 230850
Query 602 GGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGAT 659
|||||||||||||||||||||||||||||||||||||||||| | |||||||||||||
Sbjct 230851 GGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCCGACGTGCAAATCGAT 230908
Score = 105 bits (116), Expect = 3e-20
Identities = 79/93 (85%), Gaps = 0/93 (0%)
Strand=Plus/Minus
Query 24 GTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATT 83
|| ||||||||| |||||||||| | |||||||||| | || |||||||||| |||||
Sbjct 341537 GTAAAGCTCCTTGGACGAGTCGAAGTTTTTGGGAATGAAACTAGAAATGGGAGGGAAATT 341478
Query 84 TCTTCTAAAGCTAAATATTGGCCAGAGACCGAT 116
||||| ||||||||||| |||||| |||| |||
Sbjct 341477 TCTTCGAAAGCTAAATACTGGCCAAAGACGGAT 341445
>seq2
Length=2710459
Score = 127 bits (140), Expect = 9e-27
Identities = 84/93 (90%), Gaps = 0/93 (0%)
Strand=Plus/Minus
Query 455 TGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGGTGGGAACCCGTGAGGGTGCA 514
|||||||||| ||| ||||| ||||||||||||||||||||||| || | ||||||||
Sbjct 2513136 TGGGTGTCAAGCCCAAGCGCGCAATGAAAGTGAACGGAGGTGGGATCCTTTAAGGGTGCA 2513077
Query 515 CCATCGACCGATCCTGATGTCTTCGGATGGATT 547
||||||||||||||||| |||||||||||||||
Sbjct 2513076 CCATCGACCGATCCTGAAGTCTTCGGATGGATT 2513044
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 2079998519950
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |