Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pyrenochaeta_20sp._20DS3sAY3a_20[genbank_20GCA_5F001644535.1_202016-
05-18] 69 sequences; 38,501,010 total letters
Query= AAMG01000941.1
Length=299
Score E
Sequences producing significant alignments: (Bits) Value
seq1 414 2e-113
>seq1
Length=3419696
Score = 414 bits (458), Expect = 2e-113
Identities = 254/269 (94%), Gaps = 1/269 (0%)
Strand=Plus/Minus
Query 26 GACGGTCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTT 85
||||| ||||||||||||| ||||||||||||||| ||| ||||||||||||||||||||
Sbjct 469061 GACGGCCATCAGTAGGGTAGAACTAACCTGTCTCACGACAGTCTAAACCCAGCTCACGTT 469002
Query 86 CCCTATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGA 145
|||||||||| ||||||||| ||| ||||||||||||||||||||||||||||||||||
Sbjct 469001 CCCTATTAGTTGGTGAACAACTCAATGCTTACCGAATTCTGCTTCGGTATGATAGGAAGA 468942
Query 146 GCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGT 205
||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||| |
Sbjct 468941 GCCGACATCAAAGGATCAAAAAGCAACGTCGCTATGAACACTTGGCTGCCACAAGCCACT 468882
Query 206 TATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCG 265
||||||||||||||||||||||||||||||||||||| | || ||||||||| |||||||
Sbjct 468881 TATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCACACTT-GAGGGACTAGAGGATCG 468823
Query 266 ATAGGCCACACTTTCATGGTTTGTATTCA 294
|||||||||||||||||||||||||||||
Sbjct 468822 ATAGGCCACACTTTCATGGTTTGTATTCA 468794
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 854399410464
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |