Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pyrenochaeta_20sp._20DS3sAY3a_20[genbank_20GCA_5F001644535.1_202016- 05-18] 69 sequences; 38,501,010 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq2 129 2e-27 seq1 75.2 4e-11 >seq2 Length=2710459 Score = 129 bits (142), Expect = 2e-27 Identities = 86/96 (90%), Gaps = 0/96 (0%) Strand=Plus/Plus Query 448 AGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCAC 507 ||||||| |||||||||||||||||||||| |||| |||| |||||||||||| |||| Sbjct 2513352 AGTTACTACCGCCGTTTACCCGCGCTTGGTCGAATCCCTTCGTTTTGACATTCAGCGCAC 2513411 Query 508 TGGGCAGAAATCACATTGCGTCAACATCACTTTCTG 543 |||| ||||||||||||||||||||| |||||| || Sbjct 2513412 TGGGTAGAAATCACATTGCGTCAACACCACTTTTTG 2513447 >seq1 Length=3419696 Score = 75.2 bits (82), Expect = 4e-11 Identities = 49/53 (92%), Gaps = 1/53 (2%) Strand=Plus/Minus Query 6 TCTTT-TGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACC 57 ||||| |||||||| |||||||||||||||||||| ||||| ||||||||||| Sbjct 468763 TCTTTCTGCTCTACTGGAGATTTCTGTTCTCCATGGGTCCCTCTTAGGACACC 468711 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1635198871712