Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pyrenochaeta_20sp._20DS3sAY3a_20[genbank_20GCA_5F001644535.1_202016-
05-18] 69 sequences; 38,501,010 total letters
Query= AAMG01002199.1
Length=543
Score E
Sequences producing significant alignments: (Bits) Value
seq2 129 2e-27
seq1 75.2 4e-11
>seq2
Length=2710459
Score = 129 bits (142), Expect = 2e-27
Identities = 86/96 (90%), Gaps = 0/96 (0%)
Strand=Plus/Plus
Query 448 AGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCAC 507
||||||| |||||||||||||||||||||| |||| |||| |||||||||||| ||||
Sbjct 2513352 AGTTACTACCGCCGTTTACCCGCGCTTGGTCGAATCCCTTCGTTTTGACATTCAGCGCAC 2513411
Query 508 TGGGCAGAAATCACATTGCGTCAACATCACTTTCTG 543
|||| ||||||||||||||||||||| |||||| ||
Sbjct 2513412 TGGGTAGAAATCACATTGCGTCAACACCACTTTTTG 2513447
>seq1
Length=3419696
Score = 75.2 bits (82), Expect = 4e-11
Identities = 49/53 (92%), Gaps = 1/53 (2%)
Strand=Plus/Minus
Query 6 TCTTT-TGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACC 57
||||| |||||||| |||||||||||||||||||| ||||| |||||||||||
Sbjct 468763 TCTTTCTGCTCTACTGGAGATTTCTGTTCTCCATGGGTCCCTCTTAGGACACC 468711
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1635198871712
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |