Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pyrenochaeta_20sp._20DS3sAY3a_20[genbank_20GCA_5F001644535.1_202016- 05-18] 69 sequences; 38,501,010 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq1 145 2e-32 seq29 132 1e-28 >seq1 Length=3419696 Score = 145 bits (160), Expect = 2e-32 Identities = 83/85 (98%), Gaps = 0/85 (0%) Strand=Plus/Plus Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2186735 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 2186794 Query 61 CCCCGTGTCGGGATTGGGTAATTTG 85 ||||| |||||||||||||||||| Sbjct 2186795 CCCCGAATCGGGATTGGGTAATTTG 2186819 >seq29 Length=430389 Score = 132 bits (146), Expect = 1e-28 Identities = 85/93 (91%), Gaps = 0/93 (0%) Strand=Plus/Minus Query 55 CTACCTCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTA 114 |||||||| || ||||||||||||||||| ||||||||||||||||||||| || |||| Sbjct 318820 CTACCTCCACGAATCGGGATTGGGTAATTTTCGCGCCTGCTGCCTTCCTTGGGTGCGGTA 318761 Query 115 GCCGTTTCTCAGGCTCCCTCTCCGGAATCGAAC 147 ||| ||||||| ||||||||||||||||||||| Sbjct 318760 GCCATTTCTCACGCTCCCTCTCCGGAATCGAAC 318728 Score = 114 bits (126), Expect = 4e-23 Identities = 83/96 (86%), Gaps = 0/96 (0%) Strand=Plus/Minus Query 226 GAACCATCGCCGGCTCAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCC 285 ||||| || || | |||||| |||||| || ||||||| ||||||||||||| |||| Sbjct 318723 GAACCGTCACCAGTGCAAGGCTCTGCGATCCGAAAAGTTATCATGAATCACCAAGAAGCC 318664 Query 286 CCGAAGGGCGTTGGTTTTTTATCTAATAAATACACC 321 |||||||||||||||||||||||||||||| ||||| Sbjct 318663 CCGAAGGGCGTTGGTTTTTTATCTAATAAAAACACC 318628 Score = 93.3 bits (102), Expect = 1e-16 Identities = 72/86 (84%), Gaps = 0/86 (0%) Strand=Plus/Minus Query 260 AAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGGTTTTTTATCTAATAAATACA 319 ||||||| ||||||||||||| |||||| |||||||| | |||||||| ||| |||||| Sbjct 317877 AAGTTATCATGAATCACCAAGAAGCCCCAAAGGGCGTGGACTTTTTATCGAATGAATACA 317818 Query 320 CCCCTTCCGAAGTCGGGGTTTTTAGC 345 || | ||||||| |||| ||| ||| Sbjct 317817 TCCTTCCCGAAGTGGGGGATTTAAGC 317792 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510398957824