Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pyrenochaeta_20sp._20DS3sAY3a_20[genbank_20GCA_5F001644535.1_202016-
05-18] 69 sequences; 38,501,010 total letters
Query= AAMG01002244.1
Length=504
Score E
Sequences producing significant alignments: (Bits) Value
seq1 145 2e-32
seq29 132 1e-28
>seq1
Length=3419696
Score = 145 bits (160), Expect = 2e-32
Identities = 83/85 (98%), Gaps = 0/85 (0%)
Strand=Plus/Plus
Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2186735 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 2186794
Query 61 CCCCGTGTCGGGATTGGGTAATTTG 85
||||| ||||||||||||||||||
Sbjct 2186795 CCCCGAATCGGGATTGGGTAATTTG 2186819
>seq29
Length=430389
Score = 132 bits (146), Expect = 1e-28
Identities = 85/93 (91%), Gaps = 0/93 (0%)
Strand=Plus/Minus
Query 55 CTACCTCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTA 114
|||||||| || ||||||||||||||||| ||||||||||||||||||||| || ||||
Sbjct 318820 CTACCTCCACGAATCGGGATTGGGTAATTTTCGCGCCTGCTGCCTTCCTTGGGTGCGGTA 318761
Query 115 GCCGTTTCTCAGGCTCCCTCTCCGGAATCGAAC 147
||| ||||||| |||||||||||||||||||||
Sbjct 318760 GCCATTTCTCACGCTCCCTCTCCGGAATCGAAC 318728
Score = 114 bits (126), Expect = 4e-23
Identities = 83/96 (86%), Gaps = 0/96 (0%)
Strand=Plus/Minus
Query 226 GAACCATCGCCGGCTCAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCC 285
||||| || || | |||||| |||||| || ||||||| ||||||||||||| ||||
Sbjct 318723 GAACCGTCACCAGTGCAAGGCTCTGCGATCCGAAAAGTTATCATGAATCACCAAGAAGCC 318664
Query 286 CCGAAGGGCGTTGGTTTTTTATCTAATAAATACACC 321
|||||||||||||||||||||||||||||| |||||
Sbjct 318663 CCGAAGGGCGTTGGTTTTTTATCTAATAAAAACACC 318628
Score = 93.3 bits (102), Expect = 1e-16
Identities = 72/86 (84%), Gaps = 0/86 (0%)
Strand=Plus/Minus
Query 260 AAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGGTTTTTTATCTAATAAATACA 319
||||||| ||||||||||||| |||||| |||||||| | |||||||| ||| ||||||
Sbjct 317877 AAGTTATCATGAATCACCAAGAAGCCCCAAAGGGCGTGGACTTTTTATCGAATGAATACA 317818
Query 320 CCCCTTCCGAAGTCGGGGTTTTTAGC 345
|| | ||||||| |||| ||| |||
Sbjct 317817 TCCTTCCCGAAGTGGGGGATTTAAGC 317792
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1510398957824
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |