Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pyrenochaeta_20sp._20DS3sAY3a_20[genbank_20GCA_5F001644535.1_202016- 05-18] 69 sequences; 38,501,010 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq17 383 1e-101 seq18 150 1e-31 >seq17 Length=926260 Score = 383 bits (424), Expect = 1e-101 Identities = 1228/1879 (65%), Gaps = 52/1879 (3%) Strand=Plus/Plus Query 65078 TCGACCGTGAACTGGATCGCATTAGCAGCCGCCTTGGTCCTAAGATAGTACATGCCGGTC 65137 || || ||||| ||||| | | || || ||| |||| | || ||||||||||| ||| Sbjct 105625 TCCACAGTGAATTGGATAGGAGCAGAGGCGGCCATGGTACGGAGGTAGTACATGCCCGTC 105684 Query 65138 TTGAGGCCAGCACGCCAAGCATAGAAATGCATCGATGATAATTTTGCATA-ATTCGGCTC 65196 ||||| ||| |||| || || |||||||| | | || |||| | | | ||||| Sbjct 105685 TTGAGACCAAGCTTCCAACCAGCAAAGTGCATCGACG-TGATCTTGCCCATAGTAGGCTC 105743 Query 65197 GGCCACATGCATATTCAACGACTGACTCTGATCGATGTAACGACCACGATCTGCAGCCAT 65256 || || || || | |||||| |||||||||| | |||||| || |||||||| Sbjct 105744 CTTCATGTGGATGTTGAGAGACTGAGACTGATCGATGAAGGCACCACGGTCAGCAGCCAT 105803 Query 65257 GTCAATGATACGACGTCCCGATATCTCCCAGACGGTCTTGTACAGGCGACGTAC-CTCAA 65315 | ||||| || || || ||||| || |||||||| || | | | ||| Sbjct 105804 CTGGATGATGGTTCGCTGAGAGATTTCCCAAACAGTCTTGTAAAGA-GTCTTGGTCTCTT 105862 Query 65316 TTGGAATCTCCTCAATGTCCTGGACTGAACCACGACGTGCAATAATGCGATTACGCATCG 65375 ||||| | |||| |||| || |||| |||||| || ||||| ||| Sbjct 105863 CAGGAATGTTGGGAATGCGTTGGATGGAGCCACCTTCTGCAATGATACGATTCTTCATGT 105922 Query 65376 ACTCTGACCACAAACCCAAATCGATAAGATGTTGAACCAAGTGACGATTGATGACTTGGA 65435 ||| ||||||| ||||| ||||| |||| | || || | |||| |||||||| Sbjct 105923 TCTCAGACCACAGACCCATATCGACCAGATCCTTAAGCAGCCATGGGTTGACGACTTGGA 105982 Query 65436 ACTCGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGGGTTCAAAGGATTCAG 65495 |||| || | || ||||| ||| |||||||| || ||| || |||||| | || Sbjct 105983 ACTCACCAGCGAGCACACGGCGGGAGTAGATGTTCGATGTGTATGGCTCAAAGCACTCGT 106042 Query 65496 TGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGACCAACAATGAGTTTC 65555 |||| || || || || | |||||||||||||||||||| || | ||| | ||||| | Sbjct 106043 TGTTTCCGAGGATCTGAGAGGTAGATGCAGTTGGCATGGGTGCAATCAAAAGAGAGTTGC 106102 Query 65556 GCAATCCGTTCATTTCAATGTTGTGACGCAATTCGTCCCAGTTCCACATCGGTTTATCGT 65615 | | || | | |||| || | || | |||||| ||||| | | | || Sbjct 106103 GAACACCATGCTGAGCAATCTTCTCCTTCAGGGAGGCCCAGTCCCACA---GATCA--GT 106157 Query 65616 CGACATCCACGGGCCACATATCCTGTTGCAGGGTTCC----GATACTGGCCGGTGAACCG 65671 | || || |||||| || | || || | || || |||||| ||||| Sbjct 106158 AGGAGTC-ACATTCCACATGTCGTACTGAAGAATACCCTGAGACACTGGC----GAACCC 106212 Query 65672 AGGAAACTATCGTACACTCCCTCCTCCTTGGCAAGTTGACA-GCTGGTCTCGAGTGCGGC 65730 | | | | ||| || |||||||| | | ||| | || | ||| ||||| Sbjct 106213 TCGTAGGTCTGGTATGGGCCGAGTTCCTTGGCGATGTCACAAGATGAAGT-GAGGGCGGC 106271 Query 65731 AAAATAAATGGTCTCGAAAATGCGTCGATTAAG-TTCACGTGCCTCATCGCT-CTCGTAC 65788 || ||||| ||||| || | || || ||| | ||||| | || |||| | Sbjct 106272 GTGGTAGATGGTTTCGAAGATCTGGATGTTGAGCTTCTTG-GCCTC-TGGCGACTCGAAG 106329 Query 65789 GGCATACCCAT---CAGGACAAAAGTGTCGGCCAGACCTTGAACTCCAATACCGATGGGA 65845 |||| | || ||||| ||| || || |||||||| || || || || || || Sbjct 106330 GGCAAGCGCAGAGCCAGGA---AAGCATCAGCAAGACCTTGGACACCCATGCCAATAGGC 106386 Query 65846 CGATGACGCAAATTGGAACGTCTCGCCTCAGGTACAGGGTAGTAATTGATATCGATAATG 65905 | || || || ||| || | ||||| || ||||||| |||| ||||| || Sbjct 106387 CTGTGGCGGAAGTTGCTGCGACGTGCCTCCTCGACTGGGTAGTGGTTGACCTCGATGATC 106446 Query 65906 CGATTCAAATTGCGTGTCACCACATGCACGATA-CGTCGCAATTGTTCGAAATCAAAATG 65964 ||||||||||| || || || || || ||| | | | || ||| || || | Sbjct 106447 TTGTTCAAATTGCGAGTGACAACCTGGGTGACCTCGT-GAAGCTTTTGGAAGTCGAACTC 106505 Query 65965 TTTAGGACGATCGGGAGTGCCGGACACCACAAACTTGGGAAGGGCAAGAGATGCGAGGTT 66024 | || || | | ||||| || || ||||| || || || || Sbjct 106506 GCCA-------CGCTTGT-----AATCAACAAAGGATGGGAGAGCAAGGGAAGCAAGATT 106553 Query 66025 GCAGACAGCTATCTCGTCAGGAGCGGTATACTCGACAATTTCGGTGCACAGATTACTGCA 66084 ||||||||| | |||||||||||| || ||||||| || || ||||| || || || Sbjct 106554 GCAGACAGCCACCTCGTCAGGAGCAGTGTACTCGATGATCTCAGTGCAGAGGTTGGAGCT 106613 Query 66085 GCGTATGGTGCCCAAATTCTGTTGATTACTCTTGCGATTGCATGCATCCTTGTACATCAT 66144 || || || |||| |||| || || ||||| | ||||| || |||||||| | ||| Sbjct 106614 TCGGATAGTACCCAGGTTCTTCTGGTTGCTCTTCCTGTTGCAGGCGTCCTTGTAGAGCAT 106673 Query 66145 GTACGGAGTGCCGGTCTCAACTTGGGACTCAATGATGGCGTGCCAAAGAGCGCGTGCCTT 66204 | | || | || ||||| || | ||| | ||||| | |||||| | || Sbjct 106674 GAAAGGGTTACCAGTCTCGGTCTGCGCCTCGAGAATGGCATACCAAAGCTTCTGGGCACG 106733 Query 66205 CACCGT---ACGTACCGCCCTACCTTTGCGTTCGTAATGTTCGTAGAGGTGTTCGAAGGA 66261 || || ||| ||| | | | | | ||||| | | |||||| | ||||| Sbjct 106734 GACGGTTTCACG-ACCACGATTCTCCTTC--TCGTAGCGGTGGTAGAGCTCCTCGAACTC 106790 Query 66262 TTCACCCCATACTTCGGACAGACATGGACACTTGTGTGGACACATCAGCGACCAATCACC 66321 ||||| | || |||| |||| ||| || | ||||| | ||||| ||| ||||| Sbjct 106791 ATCACCGTAAACATCGGCAAGACCAGGAGCCTCATTGGGACAGAACAGCGTCCATTCACC 106850 Query 66322 ATCCTGTTCTACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCG 66381 || || || || || ||| || ||||| || ||||| | |||||||||||||| || Sbjct 106851 ATTCTCTTGGACGCGCTTCATGAAGAGATCGGGGATCCACAAAGCGTAGAAGAGATCACG 106910 Query 66382 TGCTCGTTGCTCCTCAATGCCGTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGC 66441 || || ||| || ||||||| || ||||||||||| ||||| | |||| ||||| Sbjct 106911 AGCGCGGACCTCTTCCTTGCCGTGGTTCTTGCGCAAGTCAAGGAAGCCGAAGACATCGGC 106970 Query 66442 ATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGCCACCTTGGTCGAC 66501 |||||||| || || |||||||| || | || ||| ||| |||||| ||||| || Sbjct 106971 GTGCCATGGCTCAAGATAGATGGCAAAGGCACCGGGACGCTTGTTGCCACCCTGGTCAAC 107030 Query 66502 GTAGCGAGCGACATTGTTGAAGACACGCAACATCGGTACGAGCCCGTTAGATTTGCCATT 66561 ||| || || |||||| ||||||| | ||| || | ||| || || || | || || Sbjct 107031 GTAACGTGCTGTGTTGTTGTAGACACGGAGCATAGGAATGAGACCATTCGAAGTTCCGTT 107090 Query 66562 GGTGCCGTCGATGGGGGATCCTCGTGCCCGTATATCGTGAACATTCAGACCAATACCACC 66621 |||||| ||||| ||| ||| || || ||| || || || || |||||||| || Sbjct 107091 GGTGCCACCGATGTAGGAGCCTGTGGCACGGATACGATGCACGTTGAGGCCAATACCGCC 107150 Query 66622 GGCCGTCTTCGAGATGGCAGCACAATCGGCCACTGTCCGGAATATGCCGTCAATGGAGTC 66681 || ||||| ||||| ||||| || ||| | | || ||||||||| ||| Sbjct 107151 AGCAGTCTTGGAGATCAAGGCACAGGTCTTCAGTGTGTCGTAGATACCGTCAATGCTGTC 107210 Query 66682 ACCCTTGATGGTCAGGAGGTAGCATGAACTAAGTTGGGGTTTGGGTGTGGCGGCCGAGAA 66741 | || ||| | |||| |||| || | || || || ||| | || ||| Sbjct 107211 CTCTTTCATGTCAATGAGGAAGCAGGAGGACATCTGAGGGGATGGAGTGCCTGCGTTGAA 107270 Query 66742 GAGGGTGGGTGTAGCGTGCGTAAAGTAATGGCGAGACATGTAATTGTACGTCTCGATGAC 66801 ||| || || | ||||| |||||||| | | |||||||| | ||||||||| ||| | Sbjct 107271 GAGCGTCGGCGAGGCGTGTGTAAAGTACTTCTGTGACATGTAGTCGTACGTCTCAATGGC 107330 Query 66802 AGCATCAATGTTTTCGCCATGAATCCCGAGTGC-ACATCGCATCAGGAGGTATTGAGGCC 66860 || |||| | ||| ||||| |||| || ||| |||||||| | || ||| || | Sbjct 107331 CTTCTCGATGTCATTGCCGTGAATGCCGACAGCGACA-CGCATCAGCATGTGTTGTGGAC 107389 Query 66861 GTTCGACCAGCCGATCCTTGATATGCATTAAGTAGGAGCGTTCCAGGGTCTTGATACCAA 66920 | ||| | | | | ||||| | | | ||| ||||| || |||||||||| || | Sbjct 107390 GCTCGGCAACCTTGCCGTTGATGCGGAGGAGGTATGAGCGCTCGAGGGTCTTGAAGCCGA 107449 Query 66921 AGTACGAGTAATTGAAATC 66939 || || ||| ||||| || Sbjct 107450 AGAACTGGTAGTTGAAGTC 107468 >seq18 Length=888533 Score = 150 bits (166), Expect = 1e-31 Identities = 295/434 (68%), Gaps = 3/434 (1%) Strand=Plus/Minus Query 61498 GCATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTG 61557 |||||||| | || ||||| | || ||||| || || ||||| | ||||||||| | Sbjct 234770 GCATTTGCTGCCGTGGAGGGCATCTTCTTCAGCGGCTCCTTTGCGTCCATCTTTTGGCTC 234711 Query 61558 AAGAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAG 61617 ||||| ||||| || ||||| |||||||| ||| ||| ||| | || || ||||||||| Sbjct 234710 AAGAAGCGTGGTCTGATGCCAGGTCTGACATTCTCCAACGAGCTCATCTCCCGCGACGAG 234651 Query 61618 GGCATGCATTGTGATTTTGCTGTTTTGCTATTCAAACGCTATCTGGTGAATCGTCCGTCG 61677 || |||||| |||||| || |||| ||| | || ||| || || || Sbjct 234650 GGTATGCATACTGATTTCGCATGCCTGCTCTTC--TCTCT-TCTCAACAACCGCCCCAGC 234594 Query 61678 GAGGAGCGTGTGGGTGAGATTGTTCGTGAGGCGGTAACTATCGAACAGGAATTTCTGACT 61737 ||||| ||| | || | |||||| || || || || || || || ||| Sbjct 234593 AAGGAGTCTGTCCAGGCCATCATCACTGAGGCTGTCACAATTGAGCAAGAGTTCTTGAGC 234534 Query 61738 GACGCTTTGCCCGTCTCACTCATCGGCATGAATTGTGGACTAATGTCGCAGTATATTGAA 61797 || ||| | ||| | |||| | || ||||| || |||| ||||| ||||| Sbjct 234533 GAGGCTCTCCCCTGCGCACTTCTTGGTATGAACGCCACCCTTATGTGCCAGTACATTGAG 234474 Query 61798 TTTGTTGCCGACCGTCTGTTGGTCGATTTGGGTATGAAGCGGATCTATAATACGAAAAAC 61857 || |||||||| || ||| || | | | | || | | | |||| ||| | | ||| Sbjct 234473 TTCGTTGCCGATCGCCTGCTGTTGGCTCTCGGCAACACCAAGGTCTACAATGCCACCAAC 234414 Query 61858 CCATTTGATTTCATGGACATGATTTCGCTGGATGGCAAGACGAATTTTTTCGAGAAACGT 61917 || || || |||||||| | || ||||| | ||||||||| || || |||||||| ||| Sbjct 234413 CCCTTCGACTTCATGGAGAACATCTCGCTAGCTGGCAAGACCAACTTCTTCGAGAAGCGT 234354 Query 61918 GTAGGCGACTATCA 61931 || || || || || Sbjct 234353 GTTGGTGATTACCA 234340 Score = 116 bits (128), Expect = 3e-21 Identities = 206/295 (70%), Gaps = 9/295 (3%) Strand=Plus/Minus Query 61090 TGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTGTCC 61149 |||| |||||||| ||||| || |||||||||||||| | ||||| | ||| | ||| Sbjct 235229 TGGCAAATGTACAAGAAGGCCGAGGCTTCCTTCTGGACTGCTGAGGAAATTGATCTTTCC 235170 Query 61150 AAAGACATGAATGACTGG---GAGCG-TTTATCGAGCGGTGAACAACATTTCATTAAACA 61205 || || | |||||||| |||| || | ||| || || | ||||| || Sbjct 235169 AAGGATCTCCATGACTGGAACAAGCGATTGAACGA-CGACGAGCGCTTCTTCATCTCCCA 235111 Query 61206 TGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACG--T 61263 || | || ||||| || || || ||||| || ||||| ||||| | | || || | Sbjct 235110 CGTCCTCGCCTTCTTCGCTGCCTCCGACGGCATTGTCAACGAGAACCTCGTCGAGCGCTT 235051 Query 61264 TTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATG 61323 ||| || || || ||| | | ||||| || || |||||||| |||||||| ||| Sbjct 235050 TTCCGGC--GAAGTACAAATCCCCGAGGCACGATGCTTCTACGGTTTCCAGATCATGATG 234993 Query 61324 GAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGC 61378 ||||| ||||||| |||| || | | |||||||| || |||||||| |||| Sbjct 234992 GAGAACATCCACTCCGAGACATATTCTCTGCTCATCGACACATACATCAGCGAGC 234938 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397567665670160