Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pyrenochaeta_20sp._20UM_20256_20[genbank_20GCA_5F000359685.1_202013- 04-10] 254 sequences; 35,484,281 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq139 277 3e-72 seq132 212 9e-53 seq150 165 1e-38 seq144 140 5e-31 >seq139 Length=9664 Score = 277 bits (306), Expect = 3e-72 Identities = 201/229 (88%), Gaps = 3/229 (1%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| ||||||| ||| |||||| ||||||||||||| ||| | Sbjct 410 GTACAAAGGGCAGGGACGTAATCAACGCATGCT-GATGACACGCGCTTACTAGGCATT-C 353 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATT 119 ||||||||||| ||| |||||||||| |||||||||| ||||| | ||| | |||||| Sbjct 352 CTCGTTGAAGAGCAATAATTGCAATGCTCTATCCCCAGCACGACAGAGTTTAACAAGATT 293 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 |||| ||||| |||||||||||| |||||||| | ||||||||||||||||||| Sbjct 292 ACCCAGACCTTCCGGCCAAGGTGAAGAACTCGTTGGCTCTGTCAGTGTAGCGCGCGTGCG 233 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 228 ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 232 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 184 Score = 277 bits (306), Expect = 3e-72 Identities = 201/229 (88%), Gaps = 3/229 (1%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| ||||||| ||| |||||| ||||||||||||| ||| | Sbjct 1709 GTACAAAGGGCAGGGACGTAATCAACGCATGCT-GATGACACGCGCTTACTAGGCATT-C 1652 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATT 119 ||||||||||| ||| |||||||||| |||||||||| ||||| | ||| | |||||| Sbjct 1651 CTCGTTGAAGAGCAATAATTGCAATGCTCTATCCCCAGCACGACAGAGTTTAACAAGATT 1592 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 |||| ||||| |||||||||||| |||||||| | ||||||||||||||||||| Sbjct 1591 ACCCAGACCTTCCGGCCAAGGTGAAGAACTCGTTGGCTCTGTCAGTGTAGCGCGCGTGCG 1532 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 228 ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1531 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 1483 >seq132 Length=15117 Score = 212 bits (234), Expect = 9e-53 Identities = 186/228 (82%), Gaps = 3/228 (1%) Strand=Plus/Minus Query 2 TACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTCC 61 ||||||||||||||||||| ||||||| ||| ||||| ||||||||||||| ||| || Sbjct 2569 TACAAAGGGCAGGGACGTAATCAACGCATGCTA-ATGACACGCGCTTACTAGGCATT-CC 2512 Query 62 TCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATTA 120 ||||| |||| || |||| |||| |||||||| | |||||| | ||| | ||||||| Sbjct 2511 TCGTTAAAGAGTAATAATTATAATGCTCTATCCCTAGCACGATAGAGTTTAATAAGATTA 2452 Query 121 CCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGG 180 || ||||| || ||||| | ||||||| | | |||||||||||||||||| Sbjct 2451 CCTAGACCTTCTAGCTAAGGTAAAGAACTCGTTAGCTCTGTTAGTGTAGCGCGCGTGCGG 2392 Query 181 CCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 228 ||||||||||||||||||||||||||||| ||||| |||||||||||| Sbjct 2391 CCCAGAACATCTAAGGGCATCACAGACCTATTATTACCTCAAACTTCC 2344 Score = 187 bits (206), Expect = 4e-45 Identities = 180/227 (79%), Gaps = 3/227 (1%) Strand=Plus/Minus Query 2 TACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTCC 61 || |||||| ||||||||| | ||||| ||| ||| | ||||||||||||| ||| || Sbjct 10874 TATAAAGGGTAGGGACGTAATTAACGCATGCT-GATAATACGCGCTTACTAGGTATT-CC 10817 Query 62 TCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATTA 120 |||||||||| || ||||| |||| |||||||| | |||||| | ||| | ||||||| Sbjct 10816 TCGTTGAAGAGTAATAATTGTAATGCTCTATCCCTAGCACGATAGAGTTTAATAAGATTA 10757 Query 121 CCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGG 180 || ||||| || ||||| | ||||||| | | ||| |||||||||||||| Sbjct 10756 CCTAGACCTTCTAGCTAAGGTAAAGAACTCGTTAGCTCTGTTAGTATAGCGCGCGTGCGG 10697 Query 181 CCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTC 227 ||||||| ||||||||| || |||||||||||||| ||||||||||| Sbjct 10696 CCCAGAATATCTAAGGGTATTACAGACCTGTTATTACCTCAAACTTC 10650 >seq150 Length=5836 Score = 165 bits (182), Expect = 1e-38 Identities = 175/227 (77%), Gaps = 3/227 (1%) Strand=Plus/Plus Query 2 TACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTCC 61 ||||||||| ||||||||| | ||||| ||| || || ||||||||||||| ||| || Sbjct 3268 TACAAAGGGTAGGGACGTAATTAACGCATGCTA-ATAACACGCGCTTACTAGGTATT-CC 3325 Query 62 TCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATTA 120 | || |||| || ||||||||| |||||||| | ||| || | ||| | ||||||| Sbjct 3326 TTATTAAAGAGTAATAATTGCAATACTCTATCCCTAGCACAATAGAGTTTAATAAGATTA 3385 Query 121 CCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGG 180 || ||||| || ||||| | |||||||| | | ||| |||||| ||||||| Sbjct 3386 CCTAGACCTTCTAGCTAAGGTAAAGAACTCGTTGGCTCTGTTAGTATAGCGCACGTGCGG 3445 Query 181 CCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTC 227 || ||||||||||||||||| | |||||| ||||| ||| ||||||| Sbjct 3446 CCTAGAACATCTAAGGGCATTATAGACCTATTATTACCTTAAACTTC 3492 >seq144 Length=7156 Score = 140 bits (154), Expect = 5e-31 Identities = 170/228 (75%), Gaps = 3/228 (1%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 ||| |||||| ||||||||| | || || || || ||||||||||||| ||| | Sbjct 2573 GTATAAAGGGTAGGGACGTAATTAATATATACTA-ATAACACGCGCTTACTAGGTATT-C 2516 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATT 119 || || |||| || ||||| ||| |||||||| | |||||| | ||| | |||||| Sbjct 2515 CTTATTAAAGAGTAATAATTGTAATACTCTATCCCTAGCACGATAGAGTTTAATAAGATT 2456 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 ||| ||||| || ||||| | ||| || | || ||||||||||||||||| Sbjct 2455 ACCTAGACCTTCTAGCTAAGGTAAAGAACTTATTAGCTCTATTAGTGTAGCGCGCGTGCG 2396 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTC 227 ||| |||| ||||||||| || | |||||| ||||||||| ||||||| Sbjct 2395 GCCTAGAATATCTAAGGGTATTATAGACCTATTATTGCCTTAAACTTC 2348 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751998149610