Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pyrenochaeta_20sp._20UM_20256_20[genbank_20GCA_5F000359685.1_202013- 04-10] 254 sequences; 35,484,281 total letters Query= AAMG01000190.1 Length=117 Score E Sequences producing significant alignments: (Bits) Value seq139 187 1e-45 seq150 129 3e-28 seq132 123 1e-26 seq144 105 4e-21 >seq139 Length=9664 Score = 187 bits (206), Expect = 1e-45 Identities = 113/118 (96%), Gaps = 1/118 (1%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGAT-AACATCGCC 59 ||||||||| |||||||||||||||||||||||||||||||||||| | ||||||||| Sbjct 8921 GAACCCAAAAACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAAAAAAGAACATCGCC 8862 Query 60 CGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 8861 CGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 8804 >seq150 Length=5836 Score = 129 bits (142), Expect = 3e-28 Identities = 99/116 (85%), Gaps = 1/116 (1%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGAT-AACATCGCC 59 ||||| ||| ||||| |||||||||||||||| ||||||| |||| | ||||||||| Sbjct 3795 GAACCTAAAAACTTTAATTTCTCGTAAGGTGCTAAGCGAGTTAAAAAAAAGAACATCGCC 3854 Query 60 CGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTC 115 | |||||||||||||||||||||| ||||||||||||| |||||| || ||||| Sbjct 3855 CAATCCCTAGTCGGCATAGTTTACAGTTAAGACTACGATAGTATCTAATTATCTTC 3910 >seq132 Length=15117 Score = 123 bits (136), Expect = 1e-26 Identities = 99/118 (84%), Gaps = 1/118 (1%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGAT-AACATCGCC 59 ||||| ||| ||||| |||||| |||||| | ||| |||||||| | ||||||||| Sbjct 2042 GAACCTAAAAACTTTAATTTCTTATAAGGTACTAAGCAAGTCAAAAAAAAGAACATCGCC 1983 Query 60 CGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 |||||||||||||||||||||| ||||||||||||||||||||| || ||||||| Sbjct 1982 TAATCCCTAGTCGGCATAGTTTACAGTTAAGACTACGACGGTATCTAATTATCTTCGA 1925 Score = 123 bits (136), Expect = 1e-26 Identities = 97/115 (84%), Gaps = 1/115 (1%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGAT-AACATCGCC 59 ||||| ||| ||||| |||||||||||||||| ||||||| |||| | || ||| || Sbjct 10347 GAACCTAAAAACTTTAATTTCTCGTAAGGTGCTAAGCGAGTTAAAAAAAAGAATATCACC 10288 Query 60 CGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTT 114 ||||||||| ||||||||||||||||||||||||||||||||| ||| |||| Sbjct 10287 TAATCCCTAGTTAGCATAGTTTACGGTTAAGACTACGACGGTATCTAATCATCTT 10233 >seq144 Length=7156 Score = 105 bits (116), Expect = 4e-21 Identities = 93/115 (81%), Gaps = 1/115 (1%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGAT-AACATCGCC 59 ||||| ||| |||||||||||| |||||||| || ||| |||| | || |||||| Sbjct 2045 GAACCTAAAAACTTTGATTTCTTATAAGGTGCTAAGTAAGTTAAAAAAAAGAATATCGCC 1986 Query 60 CGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTT 114 ||||||||| ||||||||||||||||||||||| | |||||| |||||||| Sbjct 1985 TAATCCCTAGTTGGCATAGTTTACGGTTAAGACTATAATAGTATCTAATCGTCTT 1931 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 278399337060